Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 RPS2P35-201ENST00000443417 897 ntBASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCARB1Q8WTV0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
SCARB1Q8WTV0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.7■□□□□ 0.74
SCARB1Q8WTV0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 AC142472.1-201ENST00000612013 1741 ntBASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCARB1Q8WTV0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SCARB1Q8WTV0 LINC00565-201ENST00000562710 2331 ntBASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SCARB1Q8WTV0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 AC110285.7-201ENST00000624417 1536 ntBASIC19.66■□□□□ 0.74
SCARB1Q8WTV0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCARB1Q8WTV0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCARB1Q8WTV0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCARB1Q8WTV0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms