Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SMRP1Q8NCR6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.98■■□□□ 1.59
SMRP1Q8NCR6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SMRP1Q8NCR6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.98■■□□□ 1.59
SMRP1Q8NCR6 AC142381.2-201ENST00000566120 298 ntBASIC24.98■■□□□ 1.59
SMRP1Q8NCR6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
SMRP1Q8NCR6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 PBX2P1-201ENST00000493219 1291 ntBASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SMRP1Q8NCR6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SMRP1Q8NCR6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
SMRP1Q8NCR6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.59
SMRP1Q8NCR6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMRP1Q8NCR6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMRP1Q8NCR6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SMRP1Q8NCR6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMRP1Q8NCR6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMRP1Q8NCR6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SMRP1Q8NCR6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMRP1Q8NCR6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SMRP1Q8NCR6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 AC135279.3-201ENST00000610945 1311 ntBASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SMRP1Q8NCR6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SMRP1Q8NCR6 AC104564.3-201ENST00000582367 638 ntBASIC24.92■■□□□ 1.58
SMRP1Q8NCR6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.92■■□□□ 1.58
SMRP1Q8NCR6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SMRP1Q8NCR6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
SMRP1Q8NCR6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 AL031432.3-201ENST00000607698 485 ntBASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.91■■□□□ 1.58
SMRP1Q8NCR6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.9■■□□□ 1.58
SMRP1Q8NCR6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMRP1Q8NCR6 MIR5787-201ENST00000611784 55 ntBASIC24.9■■□□□ 1.58
SMRP1Q8NCR6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMRP1Q8NCR6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 SUDS3P1-201ENST00000505831 966 ntBASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.89■■□□□ 1.58
SMRP1Q8NCR6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SMRP1Q8NCR6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SMRP1Q8NCR6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 AF131216.4-201ENST00000638924 1588 ntBASIC24.88■■□□□ 1.57
SMRP1Q8NCR6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMRP1Q8NCR6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SMRP1Q8NCR6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMRP1Q8NCR6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SMRP1Q8NCR6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMRP1Q8NCR6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.86■■□□□ 1.57
SMRP1Q8NCR6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
SMRP1Q8NCR6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMRP1Q8NCR6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.86■■□□□ 1.57
SMRP1Q8NCR6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMRP1Q8NCR6 UNC93B3-201ENST00000308076 687 ntBASIC24.85■■□□□ 1.57
SMRP1Q8NCR6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMRP1Q8NCR6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.84■■□□□ 1.57
SMRP1Q8NCR6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.84■■□□□ 1.57
SMRP1Q8NCR6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.84■■□□□ 1.57
SMRP1Q8NCR6 AC142472.1-201ENST00000612013 1741 ntBASIC24.83■■□□□ 1.57
SMRP1Q8NCR6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
SMRP1Q8NCR6 AL136162.1-201ENST00000607711 1078 ntBASIC24.83■■□□□ 1.57
SMRP1Q8NCR6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms