Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF135Q8IUD6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RNF135Q8IUD6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.19■■□□□ 1.62
RNF135Q8IUD6 RARRES2P6-201ENST00000567333 442 ntBASIC25.19■■□□□ 1.62
RNF135Q8IUD6 AC092028.1-203ENST00000608262 953 ntBASIC25.19■■□□□ 1.62
RNF135Q8IUD6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF135Q8IUD6 AL121749.1-202ENST00000609313 2153 ntBASIC25.18■■□□□ 1.62
RNF135Q8IUD6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.18■■□□□ 1.62
RNF135Q8IUD6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.18■■□□□ 1.62
RNF135Q8IUD6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.18■■□□□ 1.62
RNF135Q8IUD6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF135Q8IUD6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF135Q8IUD6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RNF135Q8IUD6 AL449106.1-201ENST00000608517 1980 ntBASIC25.16■■□□□ 1.62
RNF135Q8IUD6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.16■■□□□ 1.62
RNF135Q8IUD6 AC133561.4-201ENST00000566112 224 ntBASIC25.16■■□□□ 1.62
RNF135Q8IUD6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF135Q8IUD6 AL117332.1-201ENST00000622628 974 ntBASIC25.16■■□□□ 1.62
RNF135Q8IUD6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF135Q8IUD6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF135Q8IUD6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF135Q8IUD6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
RNF135Q8IUD6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF135Q8IUD6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
RNF135Q8IUD6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF135Q8IUD6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RNF135Q8IUD6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
RNF135Q8IUD6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF135Q8IUD6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF135Q8IUD6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
RNF135Q8IUD6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF135Q8IUD6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF135Q8IUD6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.13■■□□□ 1.61
RNF135Q8IUD6 MIR3621-201ENST00000580529 85 ntBASIC25.13■■□□□ 1.61
RNF135Q8IUD6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF135Q8IUD6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 ZNRF2P3-201ENST00000424200 374 ntBASIC25.12■■□□□ 1.61
RNF135Q8IUD6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF135Q8IUD6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF135Q8IUD6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF135Q8IUD6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.11■■□□□ 1.61
RNF135Q8IUD6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF135Q8IUD6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RNF135Q8IUD6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 AC120024.1-201ENST00000562672 995 ntBASIC25.09■■□□□ 1.61
RNF135Q8IUD6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF135Q8IUD6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 MIR4466-201ENST00000606121 54 ntBASIC25.08■■□□□ 1.61
RNF135Q8IUD6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF135Q8IUD6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF135Q8IUD6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.07■■□□□ 1.6
RNF135Q8IUD6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.07■■□□□ 1.6
RNF135Q8IUD6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF135Q8IUD6 AC104564.3-201ENST00000582367 638 ntBASIC25.07■■□□□ 1.6
RNF135Q8IUD6 AC010997.5-201ENST00000609182 354 ntBASIC25.07■■□□□ 1.6
RNF135Q8IUD6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF135Q8IUD6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 AC026271.2-201ENST00000428091 497 ntBASIC25.06■■□□□ 1.6
RNF135Q8IUD6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF135Q8IUD6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RNF135Q8IUD6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms