Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDR1P51861 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CDR1P51861 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.69■■□□□ 1.7
CDR1P51861 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDR1P51861 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDR1P51861 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDR1P51861 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.68■■□□□ 1.7
CDR1P51861 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.68■■□□□ 1.7
CDR1P51861 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDR1P51861 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDR1P51861 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDR1P51861 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDR1P51861 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDR1P51861 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDR1P51861 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDR1P51861 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDR1P51861 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDR1P51861 AC145676.1-201ENST00000514988 2004 ntBASIC25.65■■□□□ 1.7
CDR1P51861 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDR1P51861 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDR1P51861 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.65■■□□□ 1.7
CDR1P51861 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDR1P51861 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CDR1P51861 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDR1P51861 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
CDR1P51861 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.65■■□□□ 1.7
CDR1P51861 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDR1P51861 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
CDR1P51861 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.64■■□□□ 1.7
CDR1P51861 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.64■■□□□ 1.7
CDR1P51861 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CDR1P51861 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.64■■□□□ 1.7
CDR1P51861 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDR1P51861 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
CDR1P51861 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.64■■□□□ 1.69
CDR1P51861 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDR1P51861 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDR1P51861 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.63■■□□□ 1.69
CDR1P51861 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.63■■□□□ 1.69
CDR1P51861 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.63■■□□□ 1.69
CDR1P51861 AC103834.1-201ENST00000520383 144 ntBASIC25.63■■□□□ 1.69
CDR1P51861 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDR1P51861 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDR1P51861 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDR1P51861 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDR1P51861 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.62■■□□□ 1.69
CDR1P51861 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDR1P51861 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
CDR1P51861 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDR1P51861 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CDR1P51861 AC020928.2-201ENST00000588717 2197 ntBASIC25.61■■□□□ 1.69
CDR1P51861 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.61■■□□□ 1.69
CDR1P51861 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.61■■□□□ 1.69
CDR1P51861 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
CDR1P51861 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CDR1P51861 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDR1P51861 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDR1P51861 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.6■■□□□ 1.69
CDR1P51861 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CDR1P51861 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDR1P51861 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.6■■□□□ 1.69
CDR1P51861 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDR1P51861 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDR1P51861 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDR1P51861 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.59■■□□□ 1.69
CDR1P51861 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CDR1P51861 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDR1P51861 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDR1P51861 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDR1P51861 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDR1P51861 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.58■■□□□ 1.69
CDR1P51861 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CDR1P51861 AL451085.2-201ENST00000605085 799 ntBASIC25.58■■□□□ 1.69
CDR1P51861 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDR1P51861 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CDR1P51861 ERN1-208ENST00000606895 2068 ntBASIC25.57■■□□□ 1.68
CDR1P51861 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CDR1P51861 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDR1P51861 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDR1P51861 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDR1P51861 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.56■■□□□ 1.68
CDR1P51861 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CDR1P51861 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.56■■□□□ 1.68
CDR1P51861 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.56■■□□□ 1.68
CDR1P51861 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDR1P51861 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDR1P51861 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDR1P51861 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDR1P51861 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDR1P51861 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.55■■□□□ 1.68
CDR1P51861 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.55■■□□□ 1.68
CDR1P51861 RPS2P7-201ENST00000447334 885 ntBASIC25.55■■□□□ 1.68
CDR1P51861 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.55■■□□□ 1.68
CDR1P51861 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDR1P51861 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.55■■□□□ 1.68
CDR1P51861 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CDR1P51861 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDR1P51861 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDR1P51861 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.54■■□□□ 1.68
CDR1P51861 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms