Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHRNA1P02708 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHRNA1P02708 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHRNA1P02708 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.18■■□□□ 1.78
CHRNA1P02708 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.18■■□□□ 1.78
CHRNA1P02708 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CHRNA1P02708 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHRNA1P02708 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.17■■□□□ 1.78
CHRNA1P02708 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.17■■□□□ 1.78
CHRNA1P02708 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CHRNA1P02708 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.17■■□□□ 1.78
CHRNA1P02708 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
CHRNA1P02708 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.17■■□□□ 1.78
CHRNA1P02708 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHRNA1P02708 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.16■■□□□ 1.78
CHRNA1P02708 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.16■■□□□ 1.78
CHRNA1P02708 AC092028.1-203ENST00000608262 953 ntBASIC26.16■■□□□ 1.78
CHRNA1P02708 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.16■■□□□ 1.78
CHRNA1P02708 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.15■■□□□ 1.78
CHRNA1P02708 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHRNA1P02708 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHRNA1P02708 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.14■■□□□ 1.78
CHRNA1P02708 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHRNA1P02708 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHRNA1P02708 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRNA1P02708 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
CHRNA1P02708 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CHRNA1P02708 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRNA1P02708 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRNA1P02708 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHRNA1P02708 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHRNA1P02708 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHRNA1P02708 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.12■■□□□ 1.77
CHRNA1P02708 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.12■■□□□ 1.77
CHRNA1P02708 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.12■■□□□ 1.77
CHRNA1P02708 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHRNA1P02708 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHRNA1P02708 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.11■■□□□ 1.77
CHRNA1P02708 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHRNA1P02708 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHRNA1P02708 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHRNA1P02708 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.1■■□□□ 1.77
CHRNA1P02708 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CHRNA1P02708 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.1■■□□□ 1.77
CHRNA1P02708 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CHRNA1P02708 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.09■■□□□ 1.77
CHRNA1P02708 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CHRNA1P02708 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHRNA1P02708 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.08■■□□□ 1.77
CHRNA1P02708 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHRNA1P02708 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 AC011551.1-201ENST00000614101 683 ntBASIC26.07■■□□□ 1.76
CHRNA1P02708 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CHRNA1P02708 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRNA1P02708 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.06■■□□□ 1.76
CHRNA1P02708 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CHRNA1P02708 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CHRNA1P02708 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CHRNA1P02708 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.05■■□□□ 1.76
CHRNA1P02708 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHRNA1P02708 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHRNA1P02708 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.05■■□□□ 1.76
CHRNA1P02708 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.05■■□□□ 1.76
CHRNA1P02708 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CHRNA1P02708 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.04■■□□□ 1.76
CHRNA1P02708 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.04■■□□□ 1.76
CHRNA1P02708 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHRNA1P02708 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CHRNA1P02708 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.03■■□□□ 1.76
CHRNA1P02708 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.03■■□□□ 1.76
CHRNA1P02708 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.03■■□□□ 1.76
CHRNA1P02708 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.03■■□□□ 1.76
CHRNA1P02708 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.03■■□□□ 1.76
CHRNA1P02708 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHRNA1P02708 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRNA1P02708 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CHRNA1P02708 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRNA1P02708 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRNA1P02708 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRNA1P02708 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRNA1P02708 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHRNA1P02708 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.01■■□□□ 1.75
CHRNA1P02708 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CHRNA1P02708 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.01■■□□□ 1.75
CHRNA1P02708 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.01■■□□□ 1.75
CHRNA1P02708 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHRNA1P02708 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHRNA1P02708 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26■■□□□ 1.75
CHRNA1P02708 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHRNA1P02708 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms