Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGA12O60330 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PCDHGA12O60330 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA12O60330 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDHGA12O60330 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA12O60330 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA12O60330 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGA12O60330 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA12O60330 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGA12O60330 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA12O60330 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA12O60330 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA12O60330 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA12O60330 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA12O60330 AC021242.3-201ENST00000607598 1377 ntBASIC23.53■■□□□ 1.36
PCDHGA12O60330 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDHGA12O60330 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHGA12O60330 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHGA12O60330 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA12O60330 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGA12O60330 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA12O60330 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
PCDHGA12O60330 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA12O60330 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGA12O60330 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA12O60330 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
PCDHGA12O60330 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA12O60330 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA12O60330 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHGA12O60330 AC120024.1-201ENST00000562672 995 ntBASIC23.51■■□□□ 1.35
PCDHGA12O60330 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA12O60330 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHGA12O60330 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGA12O60330 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
PCDHGA12O60330 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA12O60330 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGA12O60330 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGA12O60330 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGA12O60330 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGA12O60330 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHGA12O60330 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA12O60330 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA12O60330 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDHGA12O60330 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA12O60330 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
PCDHGA12O60330 MIR935-201ENST00000401179 91 ntBASIC23.48■■□□□ 1.35
PCDHGA12O60330 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDHGA12O60330 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PCDHGA12O60330 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA12O60330 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA12O60330 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA12O60330 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA12O60330 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PCDHGA12O60330 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA12O60330 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.47■■□□□ 1.35
PCDHGA12O60330 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA12O60330 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA12O60330 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA12O60330 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDHGA12O60330 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA12O60330 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA12O60330 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGA12O60330 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA12O60330 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.46■■□□□ 1.35
PCDHGA12O60330 TSPY9P-201ENST00000440215 945 ntBASIC23.46■■□□□ 1.35
PCDHGA12O60330 TSPY11P-201ENST00000442607 1045 ntBASIC23.46■■□□□ 1.35
PCDHGA12O60330 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA12O60330 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHGA12O60330 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHGA12O60330 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA12O60330 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA12O60330 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA12O60330 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.45■■□□□ 1.34
PCDHGA12O60330 AC092028.1-203ENST00000608262 953 ntBASIC23.45■■□□□ 1.34
PCDHGA12O60330 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.45■■□□□ 1.34
PCDHGA12O60330 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA12O60330 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
PCDHGA12O60330 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PCDHGA12O60330 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHGA12O60330 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA12O60330 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA12O60330 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA12O60330 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
PCDHGA12O60330 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.44■■□□□ 1.34
PCDHGA12O60330 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGA12O60330 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
PCDHGA12O60330 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
PCDHGA12O60330 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGA12O60330 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA12O60330 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGA12O60330 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA12O60330 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA12O60330 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGA12O60330 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.43■■□□□ 1.34
PCDHGA12O60330 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 726.5 ms