Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 AL031848.2-201ENST00000607670 837 ntBASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV20A0A0B4J274 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV20A0A0B4J274 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 LINC00543-201ENST00000567234 1845 ntBASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 AC103724.3-201ENST00000564481 992 ntBASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 AC133561.1-201ENST00000568600 2415 ntBASIC19.95■□□□□ 0.78
TRAV20A0A0B4J274 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV20A0A0B4J274 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 LONRF2P2-201ENST00000439212 571 ntBASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV20A0A0B4J274 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAV20A0A0B4J274 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV20A0A0B4J274 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
TRAV20A0A0B4J274 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRAV20A0A0B4J274 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRAV20A0A0B4J274 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV20A0A0B4J274 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms