Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 NFYC-AS1-201ENST00000606277 1687 ntBASIC8.36□□□□□ -1.07
LINC01554Q52M75 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC8.36□□□□□ -1.07
LINC01554Q52M75 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 AC138028.4-201ENST00000564984 1845 ntBASIC8.36□□□□□ -1.07
LINC01554Q52M75 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LINC01554Q52M75 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 MTMR9LP-203ENST00000426597 1545 ntBASIC8.35□□□□□ -1.07
LINC01554Q52M75 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AL355802.2-201ENST00000402069 882 ntBASIC8.35□□□□□ -1.07
LINC01554Q52M75 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TK2-208ENST00000545043 1120 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AC131212.4-201ENST00000623606 975 ntBASIC8.35□□□□□ -1.07
LINC01554Q52M75 MYC-209ENST00000641252 345 ntBASIC8.35□□□□□ -1.07
LINC01554Q52M75 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
LINC01554Q52M75 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LINC01554Q52M75 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms