RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
RB1-201ENST00000267163 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
RB1-201ENST00000267163 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
RB1-201ENST00000267163 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
RB1-201ENST00000267163 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
RB1-201ENST00000267163 ABCC9O60706 1549 aa21.44■■□□□ 1.02
RB1-201ENST00000267163 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
RB1-201ENST00000267163 APLP2Q06481 763 aa21.26■□□□□ 0.99
RB1-201ENST00000267163 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
RB1-201ENST00000267163 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
RB1-201ENST00000267163 TRIM41Q8WV44 630 aa21.08■□□□□ 0.96
RB1-201ENST00000267163 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
RB1-201ENST00000267163 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
RB1-201ENST00000267163 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
RB1-201ENST00000267163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
RB1-201ENST00000267163 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
RB1-201ENST00000267163 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
RB1-201ENST00000267163 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.85
RB1-201ENST00000267163 MYT1Q01538 1121 aa20.34■□□□□ 0.85
RB1-201ENST00000267163 PCGF6Q9BYE7 350 aa20.3■□□□□ 0.84
RB1-201ENST00000267163 FBLN2P98095 1184 aa20.26■□□□□ 0.83
RB1-201ENST00000267163 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
RB1-201ENST00000267163 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
RB1-201ENST00000267163 ITGAEP38570 1179 aa20.06■□□□□ 0.8
RB1-201ENST00000267163 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
RB1-201ENST00000267163 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
RB1-201ENST00000267163 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
RB1-201ENST00000267163 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
RB1-201ENST00000267163 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
RB1-201ENST00000267163 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
RB1-201ENST00000267163 ARID3CA6NKF2 412 aa19.71■□□□□ 0.75
RB1-201ENST00000267163 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
RB1-201ENST00000267163 FAM50AQ14320 339 aaKnown RBP19.62■□□□□ 0.73
RB1-201ENST00000267163 POLR3GLQ9BT43 218 aa19.57■□□□□ 0.72
RB1-201ENST00000267163 NACADO15069 1562 aa19.55■□□□□ 0.72
RB1-201ENST00000267163 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
RB1-201ENST00000267163 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
RB1-201ENST00000267163 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
RB1-201ENST00000267163 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
RB1-201ENST00000267163 TRIM52Q96A61 297 aa19.46■□□□□ 0.71
RB1-201ENST00000267163 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
RB1-201ENST00000267163 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
RB1-201ENST00000267163 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
RB1-201ENST00000267163 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
RB1-201ENST00000267163 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
RB1-201ENST00000267163 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
RB1-201ENST00000267163 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
RB1-201ENST00000267163 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
RB1-201ENST00000267163 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
RB1-201ENST00000267163 BCANQ96GW7 911 aa19.25■□□□□ 0.67
RB1-201ENST00000267163 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
RB1-201ENST00000267163 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
RB1-201ENST00000267163 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
RB1-201ENST00000267163 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
RB1-201ENST00000267163 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
RB1-201ENST00000267163 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
RB1-201ENST00000267163 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
RB1-201ENST00000267163 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
RB1-201ENST00000267163 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
RB1-201ENST00000267163 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
RB1-201ENST00000267163 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
RB1-201ENST00000267163 NEFLP07196 543 aa18.94■□□□□ 0.62
RB1-201ENST00000267163 TRHP20396 242 aaPredicted RBP18.92■□□□□ 0.62
RB1-201ENST00000267163 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
RB1-201ENST00000267163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
RB1-201ENST00000267163 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
RB1-201ENST00000267163 TSPY4P0CV99 314 aa18.89■□□□□ 0.62
RB1-201ENST00000267163 TSPY10P0CW01 314 aa18.89■□□□□ 0.62
RB1-201ENST00000267163 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
RB1-201ENST00000267163 MTUS2Q5JR59 1369 aa18.85■□□□□ 0.61
RB1-201ENST00000267163 HRCP23327 699 aa18.84■□□□□ 0.61
RB1-201ENST00000267163 ERICH6Q7L0X2 663 aa18.83■□□□□ 0.6
RB1-201ENST00000267163 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
RB1-201ENST00000267163 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
RB1-201ENST00000267163 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
RB1-201ENST00000267163 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
RB1-201ENST00000267163 CLIP1P30622 1438 aa18.7■□□□□ 0.58
RB1-201ENST00000267163 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
RB1-201ENST00000267163 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
RB1-201ENST00000267163 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
RB1-201ENST00000267163 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
RB1-201ENST00000267163 CUX2O14529 1486 aa18.65■□□□□ 0.58
RB1-201ENST00000267163 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
RB1-201ENST00000267163 EEA1Q15075 1411 aa18.62■□□□□ 0.57
RB1-201ENST00000267163 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
RB1-201ENST00000267163 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
RB1-201ENST00000267163 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
RB1-201ENST00000267163 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
RB1-201ENST00000267163 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
RB1-201ENST00000267163 SOGA1O94964 1423 aa18.57■□□□□ 0.56
RB1-201ENST00000267163 PPP1R15AO75807 674 aaPredicted RBP18.56■□□□□ 0.56
RB1-201ENST00000267163 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
RB1-201ENST00000267163 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
RB1-201ENST00000267163 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
RB1-201ENST00000267163 NEFMP07197 916 aa18.53■□□□□ 0.56
RB1-201ENST00000267163 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
RB1-201ENST00000267163 TONSLQ96HA7 1378 aa18.51■□□□□ 0.55
RB1-201ENST00000267163 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
RB1-201ENST00000267163 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
RB1-201ENST00000267163 MLECQ14165 292 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms