Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.33■□□□□ 0.04
PER3P56645 AC015922.1-201ENST00000421102 1152 ntBASIC15.33■□□□□ 0.04
PER3P56645 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.33■□□□□ 0.04
PER3P56645 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PER3P56645 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.33■□□□□ 0.04
PER3P56645 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.33■□□□□ 0.04
PER3P56645 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.33■□□□□ 0.04
PER3P56645 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.33■□□□□ 0.04
PER3P56645 AC093520.2-201ENST00000561830 333 ntBASIC15.33■□□□□ 0.04
PER3P56645 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.33■□□□□ 0.04
PER3P56645 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.33■□□□□ 0.04
PER3P56645 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PER3P56645 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.33■□□□□ 0.04
PER3P56645 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 GK-202ENST00000378941 458 ntTSL 3 BASIC15.32■□□□□ 0.04
PER3P56645 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.32■□□□□ 0.04
PER3P56645 FAM185BP-201ENST00000443595 716 ntBASIC15.32■□□□□ 0.04
PER3P56645 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PER3P56645 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.32■□□□□ 0.04
PER3P56645 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.32■□□□□ 0.04
PER3P56645 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.32■□□□□ 0.04
PER3P56645 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.32■□□□□ 0.04
PER3P56645 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 AC026691.1-201ENST00000602502 2017 ntBASIC15.32■□□□□ 0.04
PER3P56645 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.32■□□□□ 0.04
PER3P56645 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PER3P56645 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.31■□□□□ 0.04
PER3P56645 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
PER3P56645 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PER3P56645 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PER3P56645 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.31■□□□□ 0.04
PER3P56645 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.31■□□□□ 0.04
PER3P56645 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.31■□□□□ 0.04
PER3P56645 AC005225.4-201ENST00000557330 545 ntBASIC15.31■□□□□ 0.04
PER3P56645 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.31■□□□□ 0.04
PER3P56645 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 AL590787.1-201ENST00000568856 1315 ntBASIC15.31■□□□□ 0.04
PER3P56645 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.31■□□□□ 0.04
PER3P56645 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.31■□□□□ 0.04
PER3P56645 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PER3P56645 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms