Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH12P55289 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH12P55289 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH12P55289 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDH12P55289 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH12P55289 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDH12P55289 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH12P55289 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH12P55289 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH12P55289 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH12P55289 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH12P55289 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH12P55289 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 DBET-201ENST00000630918 3363 ntBASIC15.4■□□□□ 0.06
CDH12P55289 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH12P55289 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 PTCHD3P3-201ENST00000403073 906 ntBASIC15.4■□□□□ 0.06
CDH12P55289 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH12P55289 AF238378.1-201ENST00000526806 358 ntBASIC15.4■□□□□ 0.06
CDH12P55289 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH12P55289 LINC01711-201ENST00000598340 967 ntBASIC15.4■□□□□ 0.06
CDH12P55289 AC025062.2-201ENST00000605477 670 ntBASIC15.4■□□□□ 0.06
CDH12P55289 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH12P55289 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH12P55289 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH12P55289 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH12P55289 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH12P55289 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH12P55289 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 AC092384.3-202ENST00000564646 2873 ntBASIC15.39■□□□□ 0.05
CDH12P55289 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH12P55289 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH12P55289 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH12P55289 AC021087.4-201ENST00000563761 564 ntBASIC15.39■□□□□ 0.05
CDH12P55289 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
CDH12P55289 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 AC012313.10-201ENST00000623509 926 ntBASIC15.39■□□□□ 0.05
CDH12P55289 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 KRT8P39-201ENST00000396270 1433 ntBASIC15.39■□□□□ 0.05
CDH12P55289 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH12P55289 AC068418.2-201ENST00000577309 3703 ntBASIC15.39■□□□□ 0.05
CDH12P55289 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDH12P55289 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH12P55289 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH12P55289 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDH12P55289 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms