Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.112e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.24□□□□□ -0.132e-7■■□□□ 13.2
RPS3P23396 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC12.69□□□□□ -0.382e-7■■□□□ 13.2
RPS3P23396 ID3-202ENST00000463312 623 ntTSL 211.33□□□□□ -0.62e-7■■□□□ 13.2
RPS3P23396 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.622e-7■■□□□ 13.2
RPS3P23396 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.722e-7■■□□□ 13.2
RPS3P23396 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.762e-7■■□□□ 13.2
RPS3P23396 ACSS2-224ENST00000497927 580 ntTSL 49.44□□□□□ -0.92e-7■■□□□ 13.2
RPS3P23396 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.52□□□□□ -1.042e-7■■□□□ 13.2
RPS3P23396 ACSS2-218ENST00000490046 455 ntTSL 43.99□□□□□ -1.772e-7■■□□□ 13.2
RPS3P23396 ACSS2-203ENST00000461051 403 ntTSL 32.74□□□□□ -1.972e-7■■□□□ 13.2
RPS3P23396 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.941e-6■■□□□ 13.2
RPS3P23396 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.69□□□□□ -1.341e-6■■□□□ 13.2
RPS3P23396 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.34□□□□□ -1.551e-6■■□□□ 13.2
RPS3P23396 FDPS-207ENST00000468479 938 ntTSL 213.25□□□□□ -0.291e-7■■□□□ 13.2
RPS3P23396 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-6■■□□□ 13.2
RPS3P23396 SRP14-202ENST00000558243 770 ntTSL 514.34□□□□□ -0.111e-8■■□□□ 13.2
RPS3P23396 SRP14-205ENST00000559081 578 ntTSL 2 BASIC10.13□□□□□ -0.791e-8■■□□□ 13.2
RPS3P23396 DCXR-209ENST00000579155 430 ntTSL 517.49■□□□□ 0.391e-10■■□□□ 13.2
RPS3P23396 GRN-216ENST00000589923 437 ntTSL 210.2□□□□□ -0.782e-7■■□□□ 13.2
RPS3P23396 ACTG1-205ENST00000572105 1168 ntTSL 513.64□□□□□ -0.236e-25■■□□□ 13.2
RPS3P23396 RPL11-203ENST00000458455 721 ntTSL 1 (best)11.79□□□□□ -0.521e-21■■□□□ 13.2
RPS3P23396 CANX-214ENST00000508787 568 ntTSL 33.36□□□□□ -1.871e-26■■□□□ 13.2
RPS3P23396 RPL18-211ENST00000550973 1111 ntTSL 519.89■□□□□ 0.774e-9■■□□□ 13.2
RPS3P23396 RPL18-201ENST00000084795 612 ntTSL 1 (best)16.52■□□□□ 0.244e-9■■□□□ 13.2
RPS3P23396 RPL18-202ENST00000546623 541 ntTSL 515.38■□□□□ 0.054e-9■■□□□ 13.2
RPS3P23396 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.322e-7■■□□□ 13.2
RPS3P23396 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC11.18□□□□□ -0.622e-7■■□□□ 13.2
RPS3P23396 FADS2-207ENST00000520145 428 ntTSL 310.22□□□□□ -0.775e-23■■□□□ 13.2
RPS3P23396 DCXR-204ENST00000577712 429 ntTSL 514.51□□□□□ -0.091e-10■■□□□ 13.2
RPS3P23396 NOMO2-204ENST00000562312 682 ntTSL 522.95■■□□□ 1.265e-22■■□□□ 13.2
RPS3P23396 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.633e-8■■□□□ 13.2
RPS3P23396 AZGP1-206ENST00000495765 540 ntTSL 26.31□□□□□ -1.43e-10■■□□□ 13.2
RPS3P23396 HM13-218ENST00000487281 757 ntTSL 315.09■□□□□ 0.019e-18■■□□□ 13.2
RPS3P23396 HM13-225ENST00000619859 455 ntTSL 36.52□□□□□ -1.379e-18■■□□□ 13.2
RPS3P23396 ITIH2-204ENST00000473227 654 ntTSL 23.57□□□□□ -1.843e-33■■□□□ 13.1
RPS3P23396 SUN2-210ENST00000452294 621 ntTSL 415.12■□□□□ 0.014e-8■■□□□ 13.1
RPS3P23396 SUN2-218ENST00000494273 746 ntTSL 312.85□□□□□ -0.354e-8■■□□□ 13.1
RPS3P23396 PRPF8-212ENST00000575116 460 ntTSL 311.81□□□□□ -0.522e-9■■□□□ 13.1
RPS3P23396 ETFB-204ENST00000594361 2843 nt12.04□□□□□ -0.484e-20■■□□□ 13.1
RPS3P23396 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.163e-7■■□□□ 13.1
RPS3P23396 SLC1A5-206ENST00000598022 276 ntTSL 313.51□□□□□ -0.252e-18■■□□□ 13.1
RPS3P23396 EIF3F-202ENST00000528653 739 ntTSL 213.46□□□□□ -0.253e-7■■□□□ 13.1
RPS3P23396 RBX1-202ENST00000467617 1871 ntTSL 213.31□□□□□ -0.283e-7■■□□□ 13.1
RPS3P23396 EIF3F-205ENST00000531329 1072 ntTSL 212.7□□□□□ -0.383e-7■■□□□ 13.1
RPS3P23396 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC12.03□□□□□ -0.489e-13■■□□□ 13.1
RPS3P23396 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC11.26□□□□□ -0.611e-20■■□□□ 13.1
RPS3P23396 ANXA2-211ENST00000558169 557 ntTSL 411.05□□□□□ -0.643e-7■■□□□ 13.1
RPS3P23396 EIF3F-204ENST00000530219 2110 ntTSL 210.57□□□□□ -0.723e-7■■□□□ 13.1
RPS3P23396 CYB5B-203ENST00000514123 2492 ntTSL 1 (best)10.57□□□□□ -0.721e-20■■□□□ 13.1
RPS3P23396 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -13e-7■■□□□ 13.1
RPS3P23396 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.051e-20■■□□□ 13.1
RPS3P23396 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.5□□□□□ -1.211e-20■■□□□ 13.1
RPS3P23396 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.95□□□□□ -1.31e-20■■□□□ 13.1
RPS3P23396 CYB5B-206ENST00000568237 577 ntTSL 54.03□□□□□ -1.762e-20■■□□□ 13.1
RPS3P23396 CYB5B-207ENST00000568342 648 ntTSL 53.53□□□□□ -1.842e-20■■□□□ 13.1
RPS3P23396 EIF3F-207ENST00000532882 454 ntTSL 22.76□□□□□ -1.973e-7■■□□□ 13.1
RPS3P23396 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.113e-7■■□□□ 13.1
RPS3P23396 RSL1D1-210ENST00000573791 520 ntTSL 41.33□□□□□ -2.23e-7■■□□□ 13.1
RPS3P23396 MRPL42-205ENST00000549561 775 ntTSL 30.75□□□□□ -2.293e-7■■□□□ 13.1
RPS3P23396 CD164-208ENST00000506649 778 ntTSL 320.39■□□□□ 0.859e-7■■□□□ 13.1
RPS3P23396 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.6□□□□□ -1.519e-7■■□□□ 13.1
RPS3P23396 CD164-206ENST00000499860 2845 ntTSL 1 (best)2.11□□□□□ -2.079e-7■■□□□ 13.1
RPS3P23396 PTK7-216ENST00000489707 1935 ntTSL 1 (best)15.39■□□□□ 0.055e-7■■□□□ 13.1
RPS3P23396 SSR2-205ENST00000472467 1833 ntTSL 28.67□□□□□ -1.021e-16■■□□□ 13.1
RPS3P23396 LMNA-225ENST00000515824 393 ntTSL 218.88■□□□□ 0.614e-10■■□□□ 13.1
RPS3P23396 ATP5E-202ENST00000395659 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-9■■□□□ 13.1
RPS3P23396 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.092e-9■■□□□ 13.1
RPS3P23396 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.332e-9■■□□□ 13.1
RPS3P23396 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.649e-9■■□□□ 13.1
RPS3P23396 MOGS-207ENST00000462443 532 ntTSL 217.83■□□□□ 0.444e-9■■□□□ 13.1
RPS3P23396 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.49■□□□□ 0.076e-7■■□□□ 13.1
RPS3P23396 ANXA4-204ENST00000460439 543 ntTSL 413.68□□□□□ -0.226e-7■■□□□ 13.1
RPS3P23396 ANXA4-211ENST00000487351 552 ntTSL 213.24□□□□□ -0.296e-7■■□□□ 13.1
RPS3P23396 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.466e-7■■□□□ 13.1
RPS3P23396 ANXA4-212ENST00000635311 1492 ntTSL 211.76□□□□□ -0.536e-7■■□□□ 13.1
RPS3P23396 ANXA4-205ENST00000460942 576 ntTSL 510.56□□□□□ -0.726e-7■■□□□ 13.1
RPS3P23396 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)8.31□□□□□ -1.086e-7■■□□□ 13.1
RPS3P23396 COL9A3-211ENST00000477612 635 ntTSL 321.11■□□□□ 0.976e-12■■□□□ 13.1
RPS3P23396 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.242e-6■■□□□ 13.1
RPS3P23396 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC10.42□□□□□ -0.742e-6■■□□□ 13.1
RPS3P23396 DDX3X-212ENST00000616050 818 ntTSL 510.36□□□□□ -0.752e-6■■□□□ 13.1
RPS3P23396 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC10.29□□□□□ -0.762e-6■■□□□ 13.1
RPS3P23396 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC10.17□□□□□ -0.782e-6■■□□□ 13.1
RPS3P23396 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.852e-6■■□□□ 13.1
RPS3P23396 DDX3X-218ENST00000629785 3457 ntTSL 59.62□□□□□ -0.872e-6■■□□□ 13.1
RPS3P23396 DDX3X-219ENST00000630255 3289 ntTSL 59.6□□□□□ -0.872e-6■■□□□ 13.1
RPS3P23396 DDX3X-221ENST00000630858 3181 ntTSL 59.53□□□□□ -0.882e-6■■□□□ 13.1
RPS3P23396 DDX3X-220ENST00000630370 3120 ntTSL 59.4□□□□□ -0.912e-6■■□□□ 13.1
RPS3P23396 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)9.29□□□□□ -0.922e-6■■□□□ 13.1
RPS3P23396 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.91□□□□□ -1.142e-6■■□□□ 13.1
RPS3P23396 KPNB1-207ENST00000579901 594 ntTSL 49.39□□□□□ -0.919e-7■■□□□ 13.1
RPS3P23396 KPNB1-206ENST00000578718 550 ntTSL 32.55□□□□□ -29e-7■■□□□ 13.1
RPS3P23396 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.542e-6■■□□□ 13.1
RPS3P23396 AC005726.2-202ENST00000531839 1033 ntAPPRIS P5 TSL 211.46□□□□□ -0.572e-6■■□□□ 13.1
RPS3P23396 SPAG5-210ENST00000580567 899 ntTSL 39.7□□□□□ -0.862e-6■■□□□ 13.1
RPS3P23396 SPAG5-206ENST00000578479 904 ntTSL 39.7□□□□□ -0.862e-6■■□□□ 13.1
RPS3P23396 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.815e-7■■□□□ 13.1
RPS3P23396 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.64□□□□□ -1.035e-7■■□□□ 13.1
RPS3P23396 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.875e-26■■□□□ 13.1
Retrieved 100 of 24,271 protein–RNA pairs in 209 ms