RNA–Protein interactions for RNA: ENST00000578718.1

KPNB1-206, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-206ENST00000578718 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
KPNB1-206ENST00000578718 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
KPNB1-206ENST00000578718 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
KPNB1-206ENST00000578718 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
KPNB1-206ENST00000578718 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
KPNB1-206ENST00000578718 FOXD1Q16676 465 aa13.64□□□□□ -0.23
KPNB1-206ENST00000578718 ADRA2BP18089 450 aa13.29□□□□□ -0.28
KPNB1-206ENST00000578718 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
KPNB1-206ENST00000578718 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
KPNB1-206ENST00000578718 MSH5O43196 834 aa12.57□□□□□ -0.4
KPNB1-206ENST00000578718 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
KPNB1-206ENST00000578718 KCNA4P22459 653 aa12.42□□□□□ -0.42
KPNB1-206ENST00000578718 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
KPNB1-206ENST00000578718 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
KPNB1-206ENST00000578718 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
KPNB1-206ENST00000578718 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
KPNB1-206ENST00000578718 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
KPNB1-206ENST00000578718 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
KPNB1-206ENST00000578718 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
KPNB1-206ENST00000578718 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
KPNB1-206ENST00000578718 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
KPNB1-206ENST00000578718 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
KPNB1-206ENST00000578718 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
KPNB1-206ENST00000578718 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
KPNB1-206ENST00000578718 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
KPNB1-206ENST00000578718 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
KPNB1-206ENST00000578718 ZBTB22O15209 634 aa11.41□□□□□ -0.58
KPNB1-206ENST00000578718 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
KPNB1-206ENST00000578718 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
KPNB1-206ENST00000578718 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
KPNB1-206ENST00000578718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.622e-6■■□□□ 12.6
KPNB1-206ENST00000578718 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
KPNB1-206ENST00000578718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.01□□□□□ -0.65
KPNB1-206ENST00000578718 HNRNPUL2Q1KMD3 747 aaKnown RBP11.01□□□□□ -0.65
KPNB1-206ENST00000578718 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
KPNB1-206ENST00000578718 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
KPNB1-206ENST00000578718 APLP2Q06481 763 aa10.86□□□□□ -0.67
KPNB1-206ENST00000578718 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
KPNB1-206ENST00000578718 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
KPNB1-206ENST00000578718 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
KPNB1-206ENST00000578718 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-206ENST00000578718 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
KPNB1-206ENST00000578718 CAPN15O75808 1086 aa10.55□□□□□ -0.72
KPNB1-206ENST00000578718 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
KPNB1-206ENST00000578718 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
KPNB1-206ENST00000578718 FKBP8Q14318 412 aa10.47□□□□□ -0.73
KPNB1-206ENST00000578718 POLA2Q14181 598 aa10.42□□□□□ -0.74
KPNB1-206ENST00000578718 FBLN2P98095 1184 aa10.4□□□□□ -0.74
KPNB1-206ENST00000578718 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
KPNB1-206ENST00000578718 ABCB7O75027 752 aa10.34□□□□□ -0.75
KPNB1-206ENST00000578718 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
KPNB1-206ENST00000578718 DSG3P32926 999 aa10.3□□□□□ -0.76
KPNB1-206ENST00000578718 SPDYE4A6NLX3 237 aa10.25□□□□□ -0.77
KPNB1-206ENST00000578718 PROM2Q8N271 834 aa10.11□□□□□ -0.79
KPNB1-206ENST00000578718 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
KPNB1-206ENST00000578718 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
KPNB1-206ENST00000578718 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
KPNB1-206ENST00000578718 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
KPNB1-206ENST00000578718 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
KPNB1-206ENST00000578718 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-206ENST00000578718 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
KPNB1-206ENST00000578718 SSUH2Q9Y2M2 353 aa9.99□□□□□ -0.81
KPNB1-206ENST00000578718 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
KPNB1-206ENST00000578718 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
KPNB1-206ENST00000578718 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
KPNB1-206ENST00000578718 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
KPNB1-206ENST00000578718 STAG3Q9UJ98 1225 aa9.87□□□□□ -0.83
KPNB1-206ENST00000578718 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
KPNB1-206ENST00000578718 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
KPNB1-206ENST00000578718 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
KPNB1-206ENST00000578718 SPDYE1Q8NFV5 336 aaPredicted RBP9.72□□□□□ -0.85
KPNB1-206ENST00000578718 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
KPNB1-206ENST00000578718 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
KPNB1-206ENST00000578718 MIER1Q8N108 512 aa9.68□□□□□ -0.86
KPNB1-206ENST00000578718 ZBTB47Q9UFB7 747 aaPredicted RBP9.66□□□□□ -0.86
KPNB1-206ENST00000578718 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-206ENST00000578718 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
KPNB1-206ENST00000578718 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
KPNB1-206ENST00000578718 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
KPNB1-206ENST00000578718 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
KPNB1-206ENST00000578718 PKD2Q13563 968 aa9.51□□□□□ -0.89
KPNB1-206ENST00000578718 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
KPNB1-206ENST00000578718 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
KPNB1-206ENST00000578718 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
KPNB1-206ENST00000578718 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
KPNB1-206ENST00000578718 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
KPNB1-206ENST00000578718 GSE1Q14687 1217 aa9.42□□□□□ -0.9
KPNB1-206ENST00000578718 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
KPNB1-206ENST00000578718 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
KPNB1-206ENST00000578718 NUBP1P53384 320 aa9.4□□□□□ -0.9
KPNB1-206ENST00000578718 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
KPNB1-206ENST00000578718 FAM212AQ96EL1 285 aa9.38□□□□□ -0.91
KPNB1-206ENST00000578718 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
KPNB1-206ENST00000578718 RGL2O15211 777 aa9.32□□□□□ -0.92
KPNB1-206ENST00000578718 FXR2P51116 673 aaKnown RBP eCLIP9.32□□□□□ -0.924e-7■□□□□ 10.7
KPNB1-206ENST00000578718 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
KPNB1-206ENST00000578718 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
KPNB1-206ENST00000578718 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
KPNB1-206ENST00000578718 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-206ENST00000578718 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms