RNA–Protein interactions for RNA: ENST00000472467.1

SSR2-205, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 2

Gene SSR2, Length 1,833 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-205ENST00000472467 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
SSR2-205ENST00000472467 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
SSR2-205ENST00000472467 ABCC9O60706 1549 aa18.03■□□□□ 0.48
SSR2-205ENST00000472467 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
SSR2-205ENST00000472467 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
SSR2-205ENST00000472467 NACADO15069 1562 aa17.37■□□□□ 0.37
SSR2-205ENST00000472467 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
SSR2-205ENST00000472467 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
SSR2-205ENST00000472467 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
SSR2-205ENST00000472467 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
SSR2-205ENST00000472467 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
SSR2-205ENST00000472467 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSR2-205ENST00000472467 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
SSR2-205ENST00000472467 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
SSR2-205ENST00000472467 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
SSR2-205ENST00000472467 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
SSR2-205ENST00000472467 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
SSR2-205ENST00000472467 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
SSR2-205ENST00000472467 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
SSR2-205ENST00000472467 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
SSR2-205ENST00000472467 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
SSR2-205ENST00000472467 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
SSR2-205ENST00000472467 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
SSR2-205ENST00000472467 WIZO95785 1651 aa16.09■□□□□ 0.17
SSR2-205ENST00000472467 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
SSR2-205ENST00000472467 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
SSR2-205ENST00000472467 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
SSR2-205ENST00000472467 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
SSR2-205ENST00000472467 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
SSR2-205ENST00000472467 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
SSR2-205ENST00000472467 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
SSR2-205ENST00000472467 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
SSR2-205ENST00000472467 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
SSR2-205ENST00000472467 NESP48681 1621 aa15.67■□□□□ 0.1
SSR2-205ENST00000472467 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
SSR2-205ENST00000472467 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
SSR2-205ENST00000472467 CFTRP13569 1480 aa15.54■□□□□ 0.08
SSR2-205ENST00000472467 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
SSR2-205ENST00000472467 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
SSR2-205ENST00000472467 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
SSR2-205ENST00000472467 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
SSR2-205ENST00000472467 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
SSR2-205ENST00000472467 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SSR2-205ENST00000472467 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
SSR2-205ENST00000472467 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
SSR2-205ENST00000472467 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
SSR2-205ENST00000472467 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
SSR2-205ENST00000472467 WDR62O43379 1518 aa15.24■□□□□ 0.03
SSR2-205ENST00000472467 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
SSR2-205ENST00000472467 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
SSR2-205ENST00000472467 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
SSR2-205ENST00000472467 CUX1P39880 1505 aa15.2■□□□□ 0.02
SSR2-205ENST00000472467 CUX2O14529 1486 aa15.19■□□□□ 0.02
SSR2-205ENST00000472467 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
SSR2-205ENST00000472467 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SSR2-205ENST00000472467 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
SSR2-205ENST00000472467 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
SSR2-205ENST00000472467 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
SSR2-205ENST00000472467 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
SSR2-205ENST00000472467 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
SSR2-205ENST00000472467 SOGA1O94964 1423 aa15.06■□□□□ 0
SSR2-205ENST00000472467 IFT140Q96RY7 1462 aa15.04■□□□□ -0
SSR2-205ENST00000472467 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
SSR2-205ENST00000472467 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
SSR2-205ENST00000472467 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
SSR2-205ENST00000472467 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
SSR2-205ENST00000472467 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
SSR2-205ENST00000472467 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
SSR2-205ENST00000472467 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
SSR2-205ENST00000472467 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
SSR2-205ENST00000472467 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
SSR2-205ENST00000472467 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
SSR2-205ENST00000472467 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
SSR2-205ENST00000472467 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.04
SSR2-205ENST00000472467 GRIN2BQ13224 1484 aa14.83□□□□□ -0.04
SSR2-205ENST00000472467 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
SSR2-205ENST00000472467 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
SSR2-205ENST00000472467 FBLN2P98095 1184 aa14.79□□□□□ -0.04
SSR2-205ENST00000472467 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
SSR2-205ENST00000472467 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
SSR2-205ENST00000472467 CHD1O14646 1710 aa14.76□□□□□ -0.05
SSR2-205ENST00000472467 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
SSR2-205ENST00000472467 IGF1RP08069 1367 aa14.74□□□□□ -0.05
SSR2-205ENST00000472467 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
SSR2-205ENST00000472467 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
SSR2-205ENST00000472467 SYNJ2O15056 1496 aa14.71□□□□□ -0.06
SSR2-205ENST00000472467 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
SSR2-205ENST00000472467 CUL7Q14999 1698 aa14.69□□□□□ -0.06
SSR2-205ENST00000472467 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
SSR2-205ENST00000472467 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
SSR2-205ENST00000472467 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
SSR2-205ENST00000472467 EEA1Q15075 1411 aa14.65□□□□□ -0.06
SSR2-205ENST00000472467 GRIN2AQ12879 1464 aa14.65□□□□□ -0.06
SSR2-205ENST00000472467 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
SSR2-205ENST00000472467 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
SSR2-205ENST00000472467 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
SSR2-205ENST00000472467 PRXQ9BXM0 1461 aa14.58□□□□□ -0.07
SSR2-205ENST00000472467 NUP160Q12769 1436 aa14.54□□□□□ -0.08
SSR2-205ENST00000472467 CLASP1Q7Z460 1538 aa14.53□□□□□ -0.08
SSR2-205ENST00000472467 KIF21BO75037 1637 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms