RNA–Protein interactions for RNA: ENST00000579901.5

KPNB1-207, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-207ENST00000579901 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
KPNB1-207ENST00000579901 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
KPNB1-207ENST00000579901 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
KPNB1-207ENST00000579901 ABCC9O60706 1549 aa18.04■□□□□ 0.48
KPNB1-207ENST00000579901 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
KPNB1-207ENST00000579901 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
KPNB1-207ENST00000579901 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
KPNB1-207ENST00000579901 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
KPNB1-207ENST00000579901 NACADO15069 1562 aa17.64■□□□□ 0.41
KPNB1-207ENST00000579901 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
KPNB1-207ENST00000579901 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
KPNB1-207ENST00000579901 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
KPNB1-207ENST00000579901 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
KPNB1-207ENST00000579901 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
KPNB1-207ENST00000579901 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
KPNB1-207ENST00000579901 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
KPNB1-207ENST00000579901 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
KPNB1-207ENST00000579901 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
KPNB1-207ENST00000579901 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
KPNB1-207ENST00000579901 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
KPNB1-207ENST00000579901 WIZO95785 1651 aa16.64■□□□□ 0.25
KPNB1-207ENST00000579901 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
KPNB1-207ENST00000579901 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
KPNB1-207ENST00000579901 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
KPNB1-207ENST00000579901 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
KPNB1-207ENST00000579901 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
KPNB1-207ENST00000579901 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
KPNB1-207ENST00000579901 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
KPNB1-207ENST00000579901 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
KPNB1-207ENST00000579901 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
KPNB1-207ENST00000579901 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
KPNB1-207ENST00000579901 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
KPNB1-207ENST00000579901 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
KPNB1-207ENST00000579901 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
KPNB1-207ENST00000579901 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
KPNB1-207ENST00000579901 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
KPNB1-207ENST00000579901 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
KPNB1-207ENST00000579901 CFTRP13569 1480 aa15.87■□□□□ 0.13
KPNB1-207ENST00000579901 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
KPNB1-207ENST00000579901 NESP48681 1621 aa15.8■□□□□ 0.12
KPNB1-207ENST00000579901 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
KPNB1-207ENST00000579901 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
KPNB1-207ENST00000579901 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
KPNB1-207ENST00000579901 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
KPNB1-207ENST00000579901 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
KPNB1-207ENST00000579901 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
KPNB1-207ENST00000579901 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
KPNB1-207ENST00000579901 CUX1P39880 1505 aa15.67■□□□□ 0.1
KPNB1-207ENST00000579901 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
KPNB1-207ENST00000579901 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
KPNB1-207ENST00000579901 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
KPNB1-207ENST00000579901 SOGA1O94964 1423 aa15.58■□□□□ 0.08
KPNB1-207ENST00000579901 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
KPNB1-207ENST00000579901 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
KPNB1-207ENST00000579901 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
KPNB1-207ENST00000579901 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
KPNB1-207ENST00000579901 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
KPNB1-207ENST00000579901 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
KPNB1-207ENST00000579901 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
KPNB1-207ENST00000579901 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
KPNB1-207ENST00000579901 EEA1Q15075 1411 aa15.48■□□□□ 0.07
KPNB1-207ENST00000579901 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
KPNB1-207ENST00000579901 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
KPNB1-207ENST00000579901 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
KPNB1-207ENST00000579901 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
KPNB1-207ENST00000579901 CUX2O14529 1486 aa15.4■□□□□ 0.06
KPNB1-207ENST00000579901 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
KPNB1-207ENST00000579901 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
KPNB1-207ENST00000579901 WDR62O43379 1518 aa15.36■□□□□ 0.05
KPNB1-207ENST00000579901 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
KPNB1-207ENST00000579901 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
KPNB1-207ENST00000579901 KIF21BO75037 1637 aa15.32■□□□□ 0.04
KPNB1-207ENST00000579901 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
KPNB1-207ENST00000579901 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
KPNB1-207ENST00000579901 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
KPNB1-207ENST00000579901 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
KPNB1-207ENST00000579901 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
KPNB1-207ENST00000579901 IGF1RP08069 1367 aa15.25■□□□□ 0.03
KPNB1-207ENST00000579901 ABCA5Q8WWZ7 1642 aa15.25■□□□□ 0.03
KPNB1-207ENST00000579901 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
KPNB1-207ENST00000579901 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
KPNB1-207ENST00000579901 GAPVD1Q14C86 1478 aa15.22■□□□□ 0.03
KPNB1-207ENST00000579901 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
KPNB1-207ENST00000579901 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
KPNB1-207ENST00000579901 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
KPNB1-207ENST00000579901 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
KPNB1-207ENST00000579901 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
KPNB1-207ENST00000579901 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.024e-9■■■■□ 24.7
KPNB1-207ENST00000579901 CUL7Q14999 1698 aa15.18■□□□□ 0.02
KPNB1-207ENST00000579901 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
KPNB1-207ENST00000579901 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
KPNB1-207ENST00000579901 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
KPNB1-207ENST00000579901 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
KPNB1-207ENST00000579901 ADAMTS12P58397 1594 aa15.07■□□□□ 0
KPNB1-207ENST00000579901 CLIP1P30622 1438 aa15.06■□□□□ 0
KPNB1-207ENST00000579901 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
KPNB1-207ENST00000579901 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
KPNB1-207ENST00000579901 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
KPNB1-207ENST00000579901 MAGI1Q96QZ7 1491 aaPredicted RBP14.98□□□□□ -0.01
KPNB1-207ENST00000579901 FBLN2P98095 1184 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms