RNA–Protein interactions for RNA: ENST00000533626.5

EIF3F-208, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EIF3F, Length 7,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-208ENST00000533626 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
EIF3F-208ENST00000533626 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
EIF3F-208ENST00000533626 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
EIF3F-208ENST00000533626 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
EIF3F-208ENST00000533626 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
EIF3F-208ENST00000533626 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
EIF3F-208ENST00000533626 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
EIF3F-208ENST00000533626 APLP2Q06481 763 aa14.27□□□□□ -0.12
EIF3F-208ENST00000533626 MYT1Q01538 1121 aa14.19□□□□□ -0.14
EIF3F-208ENST00000533626 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
EIF3F-208ENST00000533626 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
EIF3F-208ENST00000533626 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
EIF3F-208ENST00000533626 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
EIF3F-208ENST00000533626 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
EIF3F-208ENST00000533626 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
EIF3F-208ENST00000533626 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
EIF3F-208ENST00000533626 NEFLP07196 543 aa13.79□□□□□ -0.2
EIF3F-208ENST00000533626 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
EIF3F-208ENST00000533626 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
EIF3F-208ENST00000533626 POLR3GLQ9BT43 218 aa13.65□□□□□ -0.22
EIF3F-208ENST00000533626 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
EIF3F-208ENST00000533626 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
EIF3F-208ENST00000533626 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
EIF3F-208ENST00000533626 UBTFP17480 764 aaKnown RBP13.52□□□□□ -0.24
EIF3F-208ENST00000533626 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
EIF3F-208ENST00000533626 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
EIF3F-208ENST00000533626 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
EIF3F-208ENST00000533626 ITGAEP38570 1179 aa13.41□□□□□ -0.26
EIF3F-208ENST00000533626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
EIF3F-208ENST00000533626 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
EIF3F-208ENST00000533626 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
EIF3F-208ENST00000533626 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
EIF3F-208ENST00000533626 NISCHQ9Y2I1 1504 aa13.29□□□□□ -0.28
EIF3F-208ENST00000533626 BCL11AQ9H165 835 aa13.27□□□□□ -0.29
EIF3F-208ENST00000533626 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
EIF3F-208ENST00000533626 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
EIF3F-208ENST00000533626 BCANQ96GW7 911 aa13.02□□□□□ -0.33
EIF3F-208ENST00000533626 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
EIF3F-208ENST00000533626 HRCP23327 699 aa12.97□□□□□ -0.33
EIF3F-208ENST00000533626 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
EIF3F-208ENST00000533626 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
EIF3F-208ENST00000533626 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
EIF3F-208ENST00000533626 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
EIF3F-208ENST00000533626 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
EIF3F-208ENST00000533626 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
EIF3F-208ENST00000533626 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
EIF3F-208ENST00000533626 EIF5BO60841 1220 aaKnown RBP12.81□□□□□ -0.36
EIF3F-208ENST00000533626 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
EIF3F-208ENST00000533626 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
EIF3F-208ENST00000533626 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
EIF3F-208ENST00000533626 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
EIF3F-208ENST00000533626 NEFMP07197 916 aa12.67□□□□□ -0.38
EIF3F-208ENST00000533626 ARXQ96QS3 562 aa12.66□□□□□ -0.38
EIF3F-208ENST00000533626 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
EIF3F-208ENST00000533626 ANP32CO43423 234 aa12.65□□□□□ -0.38
EIF3F-208ENST00000533626 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
EIF3F-208ENST00000533626 GLIPR1L2Q4G1C9 344 aa12.62□□□□□ -0.39
EIF3F-208ENST00000533626 FBLN2P98095 1184 aa12.61□□□□□ -0.39
EIF3F-208ENST00000533626 ANP32BQ92688 251 aaKnown RBP12.61□□□□□ -0.39
EIF3F-208ENST00000533626 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
EIF3F-208ENST00000533626 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
EIF3F-208ENST00000533626 A0A0G2JS52 829 aa12.55□□□□□ -0.4
EIF3F-208ENST00000533626 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
EIF3F-208ENST00000533626 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
EIF3F-208ENST00000533626 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
EIF3F-208ENST00000533626 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
EIF3F-208ENST00000533626 NBR1Q14596 966 aa12.48□□□□□ -0.41
EIF3F-208ENST00000533626 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
EIF3F-208ENST00000533626 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.42
EIF3F-208ENST00000533626 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
EIF3F-208ENST00000533626 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
EIF3F-208ENST00000533626 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
EIF3F-208ENST00000533626 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
EIF3F-208ENST00000533626 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
EIF3F-208ENST00000533626 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
EIF3F-208ENST00000533626 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
EIF3F-208ENST00000533626 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
EIF3F-208ENST00000533626 FKBP8Q14318 412 aa12.37□□□□□ -0.43
EIF3F-208ENST00000533626 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
EIF3F-208ENST00000533626 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
EIF3F-208ENST00000533626 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
EIF3F-208ENST00000533626 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
EIF3F-208ENST00000533626 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
EIF3F-208ENST00000533626 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
EIF3F-208ENST00000533626 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
EIF3F-208ENST00000533626 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
EIF3F-208ENST00000533626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
EIF3F-208ENST00000533626 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.46
EIF3F-208ENST00000533626 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
EIF3F-208ENST00000533626 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
EIF3F-208ENST00000533626 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
EIF3F-208ENST00000533626 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
EIF3F-208ENST00000533626 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
EIF3F-208ENST00000533626 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
EIF3F-208ENST00000533626 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
EIF3F-208ENST00000533626 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
EIF3F-208ENST00000533626 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
EIF3F-208ENST00000533626 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
EIF3F-208ENST00000533626 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
EIF3F-208ENST00000533626 DNTTIP2Q5QJE6 756 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms