RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
LAMB1-204ENST00000393561 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
LAMB1-204ENST00000393561 SUPT5HO00267 1087 aaKnown RBP19.17■□□□□ 0.66
LAMB1-204ENST00000393561 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
LAMB1-204ENST00000393561 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
LAMB1-204ENST00000393561 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
LAMB1-204ENST00000393561 APLP2Q06481 763 aa18.39■□□□□ 0.53
LAMB1-204ENST00000393561 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
LAMB1-204ENST00000393561 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
LAMB1-204ENST00000393561 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
LAMB1-204ENST00000393561 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
LAMB1-204ENST00000393561 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
LAMB1-204ENST00000393561 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
LAMB1-204ENST00000393561 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
LAMB1-204ENST00000393561 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
LAMB1-204ENST00000393561 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
LAMB1-204ENST00000393561 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.42
LAMB1-204ENST00000393561 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
LAMB1-204ENST00000393561 NEFLP07196 543 aa17.43■□□□□ 0.38
LAMB1-204ENST00000393561 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
LAMB1-204ENST00000393561 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
LAMB1-204ENST00000393561 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.34
LAMB1-204ENST00000393561 MYT1Q01538 1121 aa17.16■□□□□ 0.34
LAMB1-204ENST00000393561 ITGAEP38570 1179 aa17.03■□□□□ 0.32
LAMB1-204ENST00000393561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
LAMB1-204ENST00000393561 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
LAMB1-204ENST00000393561 HRCP23327 699 aa17.02■□□□□ 0.32
LAMB1-204ENST00000393561 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
LAMB1-204ENST00000393561 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
LAMB1-204ENST00000393561 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
LAMB1-204ENST00000393561 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
LAMB1-204ENST00000393561 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
LAMB1-204ENST00000393561 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.26
LAMB1-204ENST00000393561 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
LAMB1-204ENST00000393561 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
LAMB1-204ENST00000393561 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
LAMB1-204ENST00000393561 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
LAMB1-204ENST00000393561 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
LAMB1-204ENST00000393561 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
LAMB1-204ENST00000393561 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
LAMB1-204ENST00000393561 ABCC9O60706 1549 aa16.51■□□□□ 0.23
LAMB1-204ENST00000393561 PABPN1Q86U42 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
LAMB1-204ENST00000393561 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
LAMB1-204ENST00000393561 ANP32CO43423 234 aa16.41■□□□□ 0.22
LAMB1-204ENST00000393561 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
LAMB1-204ENST00000393561 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
LAMB1-204ENST00000393561 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
LAMB1-204ENST00000393561 BCANQ96GW7 911 aa16.27■□□□□ 0.2
LAMB1-204ENST00000393561 FBLN2P98095 1184 aa16.27■□□□□ 0.2
LAMB1-204ENST00000393561 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
LAMB1-204ENST00000393561 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
LAMB1-204ENST00000393561 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
LAMB1-204ENST00000393561 NEFMP07197 916 aa16.16■□□□□ 0.18
LAMB1-204ENST00000393561 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
LAMB1-204ENST00000393561 ARID3CA6NKF2 412 aa16.08■□□□□ 0.16
LAMB1-204ENST00000393561 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
LAMB1-204ENST00000393561 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
LAMB1-204ENST00000393561 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
LAMB1-204ENST00000393561 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.16
LAMB1-204ENST00000393561 TONSLQ96HA7 1378 aa16■□□□□ 0.15
LAMB1-204ENST00000393561 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
LAMB1-204ENST00000393561 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
LAMB1-204ENST00000393561 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
LAMB1-204ENST00000393561 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
LAMB1-204ENST00000393561 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
LAMB1-204ENST00000393561 NPM2Q86SE8 214 aaKnown RBP15.87■□□□□ 0.13
LAMB1-204ENST00000393561 FKBP8Q14318 412 aa15.85■□□□□ 0.13
LAMB1-204ENST00000393561 CHGAP10645 457 aaKnown RBP15.85■□□□□ 0.13
LAMB1-204ENST00000393561 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
LAMB1-204ENST00000393561 HNRNPUQ00839 825 aaKnown RBP eCLIP15.84■□□□□ 0.13
LAMB1-204ENST00000393561 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
LAMB1-204ENST00000393561 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
LAMB1-204ENST00000393561 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
LAMB1-204ENST00000393561 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
LAMB1-204ENST00000393561 ANP32BQ92688 251 aaKnown RBP15.78■□□□□ 0.12
LAMB1-204ENST00000393561 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
LAMB1-204ENST00000393561 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
LAMB1-204ENST00000393561 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
LAMB1-204ENST00000393561 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.75■□□□□ 0.11
LAMB1-204ENST00000393561 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
LAMB1-204ENST00000393561 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
LAMB1-204ENST00000393561 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
LAMB1-204ENST00000393561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.115e-7■■□□□ 11.7
LAMB1-204ENST00000393561 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■□□ 15.1
LAMB1-204ENST00000393561 CCDC136Q96JN2 1154 aa15.69■□□□□ 0.1
LAMB1-204ENST00000393561 SALL2Q9Y467 1007 aaPredicted RBP15.68■□□□□ 0.1
LAMB1-204ENST00000393561 MRS2Q9HD23 443 aa15.67■□□□□ 0.1
LAMB1-204ENST00000393561 CLIP1P30622 1438 aa15.66■□□□□ 0.1
LAMB1-204ENST00000393561 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
LAMB1-204ENST00000393561 KDM2AQ9Y2K7 1162 aa15.63■□□□□ 0.09
LAMB1-204ENST00000393561 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
LAMB1-204ENST00000393561 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
LAMB1-204ENST00000393561 EEA1Q15075 1411 aa15.6■□□□□ 0.09
LAMB1-204ENST00000393561 EIF4G2P78344 907 aaKnown RBP eCLIP15.6■□□□□ 0.09
LAMB1-204ENST00000393561 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
LAMB1-204ENST00000393561 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
LAMB1-204ENST00000393561 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
LAMB1-204ENST00000393561 MIER1Q8N108 512 aa15.54■□□□□ 0.08
LAMB1-204ENST00000393561 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
LAMB1-204ENST00000393561 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms