RNA–Protein interactions for RNA: ENST00000458455.1

RPL11-203, Transcript of ribosomal protein L11, humanhuman

TSL 1 (best)

Gene RPL11, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL11-203ENST00000458455 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
RPL11-203ENST00000458455 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
RPL11-203ENST00000458455 ABCC9O60706 1549 aa26.76■■□□□ 1.87
RPL11-203ENST00000458455 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
RPL11-203ENST00000458455 NACADO15069 1562 aa25.61■■□□□ 1.69
RPL11-203ENST00000458455 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
RPL11-203ENST00000458455 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
RPL11-203ENST00000458455 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
RPL11-203ENST00000458455 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
RPL11-203ENST00000458455 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
RPL11-203ENST00000458455 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
RPL11-203ENST00000458455 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
RPL11-203ENST00000458455 SCRIBQ14160 1630 aa24.77■■□□□ 1.56
RPL11-203ENST00000458455 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
RPL11-203ENST00000458455 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.55
RPL11-203ENST00000458455 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
RPL11-203ENST00000458455 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
RPL11-203ENST00000458455 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
RPL11-203ENST00000458455 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
RPL11-203ENST00000458455 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
RPL11-203ENST00000458455 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
RPL11-203ENST00000458455 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
RPL11-203ENST00000458455 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
RPL11-203ENST00000458455 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
RPL11-203ENST00000458455 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
RPL11-203ENST00000458455 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
RPL11-203ENST00000458455 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
RPL11-203ENST00000458455 WIZO95785 1651 aa23.19■■□□□ 1.3
RPL11-203ENST00000458455 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
RPL11-203ENST00000458455 NESP48681 1621 aa23.09■■□□□ 1.29
RPL11-203ENST00000458455 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
RPL11-203ENST00000458455 CUX2O14529 1486 aa23.02■■□□□ 1.28
RPL11-203ENST00000458455 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
RPL11-203ENST00000458455 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
RPL11-203ENST00000458455 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
RPL11-203ENST00000458455 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
RPL11-203ENST00000458455 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
RPL11-203ENST00000458455 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
RPL11-203ENST00000458455 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
RPL11-203ENST00000458455 CFTRP13569 1480 aa22.67■■□□□ 1.22
RPL11-203ENST00000458455 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
RPL11-203ENST00000458455 WDR62O43379 1518 aa22.65■■□□□ 1.22
RPL11-203ENST00000458455 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
RPL11-203ENST00000458455 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
RPL11-203ENST00000458455 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
RPL11-203ENST00000458455 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
RPL11-203ENST00000458455 URB2Q14146 1524 aaKnown RBP22.42■■□□□ 1.18
RPL11-203ENST00000458455 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
RPL11-203ENST00000458455 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
RPL11-203ENST00000458455 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
RPL11-203ENST00000458455 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
RPL11-203ENST00000458455 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
RPL11-203ENST00000458455 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
RPL11-203ENST00000458455 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
RPL11-203ENST00000458455 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
RPL11-203ENST00000458455 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
RPL11-203ENST00000458455 CUX1P39880 1505 aa21.97■■□□□ 1.11
RPL11-203ENST00000458455 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
RPL11-203ENST00000458455 CHD1O14646 1710 aa21.93■■□□□ 1.1
RPL11-203ENST00000458455 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
RPL11-203ENST00000458455 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
RPL11-203ENST00000458455 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.092e-13■■■■■ 44.1
RPL11-203ENST00000458455 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
RPL11-203ENST00000458455 SOGA1O94964 1423 aa21.84■■□□□ 1.09
RPL11-203ENST00000458455 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
RPL11-203ENST00000458455 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
RPL11-203ENST00000458455 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
RPL11-203ENST00000458455 RIMBP3CA6NJZ7 1639 aa21.75■■□□□ 1.07
RPL11-203ENST00000458455 RIMBP3BA6NNM3 1639 aa21.75■■□□□ 1.07
RPL11-203ENST00000458455 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
RPL11-203ENST00000458455 RIMBP3Q9UFD9 1639 aa21.75■■□□□ 1.07
RPL11-203ENST00000458455 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
RPL11-203ENST00000458455 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
RPL11-203ENST00000458455 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
RPL11-203ENST00000458455 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
RPL11-203ENST00000458455 MAGI1Q96QZ7 1491 aaPredicted RBP21.7■■□□□ 1.06
RPL11-203ENST00000458455 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
RPL11-203ENST00000458455 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
RPL11-203ENST00000458455 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
RPL11-203ENST00000458455 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
RPL11-203ENST00000458455 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
RPL11-203ENST00000458455 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
RPL11-203ENST00000458455 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
RPL11-203ENST00000458455 FBLN2P98095 1184 aa21.55■■□□□ 1.04
RPL11-203ENST00000458455 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
RPL11-203ENST00000458455 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
RPL11-203ENST00000458455 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
RPL11-203ENST00000458455 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
RPL11-203ENST00000458455 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
RPL11-203ENST00000458455 CEP170Q5SW79 1584 aa21.39■■□□□ 1.01
RPL11-203ENST00000458455 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
RPL11-203ENST00000458455 NUP160Q12769 1436 aa21.34■■□□□ 1.01
RPL11-203ENST00000458455 SHROOM2Q13796 1616 aa21.33■■□□□ 1
RPL11-203ENST00000458455 CUL7Q14999 1698 aa21.3■■□□□ 1
RPL11-203ENST00000458455 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
RPL11-203ENST00000458455 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
RPL11-203ENST00000458455 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
RPL11-203ENST00000458455 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
RPL11-203ENST00000458455 IGF1RP08069 1367 aa21.12■□□□□ 0.97
RPL11-203ENST00000458455 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms