RNA–Protein interactions for RNA: ENST00000499860.6

CD164-206, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 2,845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-206ENST00000499860 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.18
CD164-206ENST00000499860 POTEDQ86YR6 584 aa7.17□□□□□ -1.26
CD164-206ENST00000499860 AEBP2Q6ZN18 517 aaPredicted RBP7.13□□□□□ -1.27
CD164-206ENST00000499860 ILDR1Q86SU0 546 aaPredicted RBP6.83□□□□□ -1.32
CD164-206ENST00000499860 CHIC1Q5VXU3 224 aa6.77□□□□□ -1.33
CD164-206ENST00000499860 SOCS7O14512 581 aa6.51□□□□□ -1.37
CD164-206ENST00000499860 SENP3Q9H4L4 574 aaPredicted RBP6.33□□□□□ -1.4
CD164-206ENST00000499860 DNAJC5BQ9UF47 199 aa6.24□□□□□ -1.41
CD164-206ENST00000499860 LMTK3Q96Q04 1460 aa6.22□□□□□ -1.41
CD164-206ENST00000499860 TRIM41Q8WV44 630 aa6.18□□□□□ -1.42
CD164-206ENST00000499860 PCDH10Q9P2E7 1040 aa6.12□□□□□ -1.43
CD164-206ENST00000499860 PHF23Q9BUL5 403 aaPredicted RBP6.08□□□□□ -1.44
CD164-206ENST00000499860 IFFO2Q5TF58 517 aa6.02□□□□□ -1.45
CD164-206ENST00000499860 MSH5O43196 834 aa5.96□□□□□ -1.46
CD164-206ENST00000499860 IGSF5Q9NSI5 407 aa5.94□□□□□ -1.46
CD164-206ENST00000499860 FOXD1Q16676 465 aa5.92□□□□□ -1.46
CD164-206ENST00000499860 FBXO41Q8TF61 875 aa5.9□□□□□ -1.46
CD164-206ENST00000499860 SLC34A2O95436 690 aa5.8□□□□□ -1.48
CD164-206ENST00000499860 ILDR2Q71H61 639 aa5.78□□□□□ -1.48
CD164-206ENST00000499860 ERCC6L2Q5T890 1561 aa5.73□□□□□ -1.49
CD164-206ENST00000499860 CUX2O14529 1486 aa5.65□□□□□ -1.5
CD164-206ENST00000499860 CACNB1Q02641 598 aaPredicted RBP5.6□□□□□ -1.51
CD164-206ENST00000499860 DISP3Q9P2K9 1392 aa5.6□□□□□ -1.51
CD164-206ENST00000499860 SPATA31D1Q6ZQQ2 1576 aa5.48□□□□□ -1.53
CD164-206ENST00000499860 POTEHQ6S545 545 aa5.47□□□□□ -1.53
CD164-206ENST00000499860 PIAS4Q8N2W9 510 aaPredicted RBP5.36□□□□□ -1.55
CD164-206ENST00000499860 PABPN1Q86U42 306 aaKnown RBP eCLIP5.14□□□□□ -1.59
CD164-206ENST00000499860 HECW2Q9P2P5 1572 aa5.05□□□□□ -1.6
CD164-206ENST00000499860 RBAK-RBAKDNI3L0D1 243 aa5.01□□□□□ -1.61
CD164-206ENST00000499860 KDM6BO15054 1643 aa5□□□□□ -1.61
CD164-206ENST00000499860 TRHP20396 242 aaPredicted RBP4.97□□□□□ -1.61
CD164-206ENST00000499860 RNF39Q9H2S5 420 aa4.95□□□□□ -1.62
CD164-206ENST00000499860 SYNJ2O15056 1496 aa4.93□□□□□ -1.62
CD164-206ENST00000499860 PITPNM2Q9BZ72 1349 aa4.89□□□□□ -1.63
CD164-206ENST00000499860 C1QBPQ07021 282 aaKnown RBP4.88□□□□□ -1.63
CD164-206ENST00000499860 ABCC9O60706 1549 aa4.88□□□□□ -1.63
CD164-206ENST00000499860 KDM4FA0A1W2PPD8 638 aa4.87□□□□□ -1.63
CD164-206ENST00000499860 PLSCR2Q9NRY7 297 aa4.87□□□□□ -1.63
CD164-206ENST00000499860 DMRT2Q9Y5R5 561 aa4.87□□□□□ -1.63
CD164-206ENST00000499860 BICRAQ9NZM4 1560 aa4.86□□□□□ -1.63
CD164-206ENST00000499860 PPP6R1Q9UPN7 881 aa4.85□□□□□ -1.63
CD164-206ENST00000499860 RIMBP3CA6NJZ7 1639 aa4.85□□□□□ -1.63
CD164-206ENST00000499860 RIMBP3BA6NNM3 1639 aa4.85□□□□□ -1.63
CD164-206ENST00000499860 RIMBP3Q9UFD9 1639 aa4.85□□□□□ -1.63
CD164-206ENST00000499860 CECR2Q9BXF3 1484 aa4.85□□□□□ -1.63
CD164-206ENST00000499860 ADRA2BP18089 450 aa4.8□□□□□ -1.64
CD164-206ENST00000499860 NISCHQ9Y2I1 1504 aa4.79□□□□□ -1.64
CD164-206ENST00000499860 PRELPP51888 382 aa4.76□□□□□ -1.65
CD164-206ENST00000499860 SP7Q8TDD2 431 aaPredicted RBP4.74□□□□□ -1.65
CD164-206ENST00000499860 CERKQ8TCT0 537 aa4.73□□□□□ -1.65
CD164-206ENST00000499860 LTBP4Q8N2S1 1624 aa4.73□□□□□ -1.65
CD164-206ENST00000499860 OSCARQ8IYS5 282 aa4.72□□□□□ -1.65
CD164-206ENST00000499860 CCDC180Q9P1Z9 1646 aa4.72□□□□□ -1.65
CD164-206ENST00000499860 DCAF8L1A6NGE4 600 aa4.69□□□□□ -1.66
CD164-206ENST00000499860 MPNDQ8N594 471 aa4.69□□□□□ -1.66
CD164-206ENST00000499860 COL26A1Q96A83 441 aa4.69□□□□□ -1.66
CD164-206ENST00000499860 IQSEC2Q5JU85 1478 aa4.67□□□□□ -1.66
CD164-206ENST00000499860 MAPK8IP2Q13387 824 aaPredicted RBP4.65□□□□□ -1.67
CD164-206ENST00000499860 ARHGEF11O15085 1522 aa4.63□□□□□ -1.67
CD164-206ENST00000499860 MED1Q15648 1581 aaPredicted RBP4.61□□□□□ -1.67
CD164-206ENST00000499860 SENP3-EIF4A1A0A087X0R7 540 aa4.6□□□□□ -1.67
CD164-206ENST00000499860 PLPPR3Q6T4P5 718 aa4.58□□□□□ -1.68
CD164-206ENST00000499860 BAZ1AQ9NRL2 1556 aaPredicted RBP4.56□□□□□ -1.68
CD164-206ENST00000499860 CC2D2AQ9P2K1 1620 aa4.54□□□□□ -1.68
CD164-206ENST00000499860 SCAF1Q9H7N4 1312 aaKnown RBP4.53□□□□□ -1.68
CD164-206ENST00000499860 ERCC6Q03468 1493 aa4.52□□□□□ -1.69
CD164-206ENST00000499860 ADGRL1O94910 1474 aa4.48□□□□□ -1.69
CD164-206ENST00000499860 SHROOM4Q9ULL8 1493 aa4.48□□□□□ -1.69
CD164-206ENST00000499860 RBM33Q96EV2 1170 aaKnown RBP4.48□□□□□ -1.69
CD164-206ENST00000499860 LRP5O75197 1615 aa4.47□□□□□ -1.69
CD164-206ENST00000499860 DACH1Q9UI36 760 aa4.46□□□□□ -1.7
CD164-206ENST00000499860 CEP164Q9UPV0 1460 aa4.45□□□□□ -1.7
CD164-206ENST00000499860 LHX8Q68G74 356 aa4.45□□□□□ -1.7
CD164-206ENST00000499860 MYO15BQ96JP2 1530 aa4.45□□□□□ -1.7
CD164-206ENST00000499860 SLC51AQ86UW1 340 aa4.44□□□□□ -1.7
CD164-206ENST00000499860 C1QTNF8P60827 252 aa4.43□□□□□ -1.7
CD164-206ENST00000499860 TOP2BQ02880 1626 aa4.43□□□□□ -1.7
CD164-206ENST00000499860 CHRDL2Q6WN34 429 aa4.43□□□□□ -1.7
CD164-206ENST00000499860 AATKQ6ZMQ8 1374 aa4.42□□□□□ -1.7
CD164-206ENST00000499860 ARAP1Q96P48 1450 aa4.41□□□□□ -1.7
CD164-206ENST00000499860 YY1P25490 414 aa4.41□□□□□ -1.7
CD164-206ENST00000499860 SNX27Q96L92 541 aa4.4□□□□□ -1.7
CD164-206ENST00000499860 CYB5RLQ6IPT4 315 aa4.4□□□□□ -1.71
CD164-206ENST00000499860 HOXD11P31277 338 aaPredicted RBP4.36□□□□□ -1.71
CD164-206ENST00000499860 DSG3P32926 999 aa4.35□□□□□ -1.71
CD164-206ENST00000499860 PTPRTO14522 1441 aa4.35□□□□□ -1.71
CD164-206ENST00000499860 EVX2Q03828 476 aa4.33□□□□□ -1.72
CD164-206ENST00000499860 NACADO15069 1562 aa4.33□□□□□ -1.72
CD164-206ENST00000499860 RSF1Q96T23 1441 aaPredicted RBP4.32□□□□□ -1.72
CD164-206ENST00000499860 THOC2Q8NI27 1593 aaKnown RBP4.32□□□□□ -1.72
CD164-206ENST00000499860 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
CD164-206ENST00000499860 HAX1O00165 279 aa4.31□□□□□ -1.72
CD164-206ENST00000499860 UPF1Q92900 1129 aaKnown RBP eCLIP4.3□□□□□ -1.722e-10■□□□□ 10
CD164-206ENST00000499860 TNS4Q8IZW8 715 aa4.29□□□□□ -1.72
CD164-206ENST00000499860 MED14O60244 1454 aa4.28□□□□□ -1.72
CD164-206ENST00000499860 DCAF1Q9Y4B6 1507 aa4.28□□□□□ -1.72
CD164-206ENST00000499860 DLL1O00548 723 aa4.27□□□□□ -1.73
CD164-206ENST00000499860 PPEF1O14829 653 aaPredicted RBP4.27□□□□□ -1.73
CD164-206ENST00000499860 SNAPC4Q5SXM2 1469 aa4.26□□□□□ -1.73
CD164-206ENST00000499860 RBM42Q9BTD8 480 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms