RNA–Protein interactions for RNA: ENST00000548545.1

MRPL42-204, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene MRPL42, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-204ENST00000548545 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
MRPL42-204ENST00000548545 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
MRPL42-204ENST00000548545 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
MRPL42-204ENST00000548545 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
MRPL42-204ENST00000548545 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
MRPL42-204ENST00000548545 FOXD1Q16676 465 aa17.01■□□□□ 0.31
MRPL42-204ENST00000548545 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
MRPL42-204ENST00000548545 ADRA2BP18089 450 aa16.29■□□□□ 0.2
MRPL42-204ENST00000548545 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
MRPL42-204ENST00000548545 MSH5O43196 834 aa15.71■□□□□ 0.11
MRPL42-204ENST00000548545 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
MRPL42-204ENST00000548545 POTEDQ86YR6 584 aa15□□□□□ -0.01
MRPL42-204ENST00000548545 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
MRPL42-204ENST00000548545 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
MRPL42-204ENST00000548545 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
MRPL42-204ENST00000548545 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
MRPL42-204ENST00000548545 KCNA4P22459 653 aa14.59□□□□□ -0.07
MRPL42-204ENST00000548545 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
MRPL42-204ENST00000548545 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
MRPL42-204ENST00000548545 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
MRPL42-204ENST00000548545 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
MRPL42-204ENST00000548545 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
MRPL42-204ENST00000548545 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
MRPL42-204ENST00000548545 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
MRPL42-204ENST00000548545 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
MRPL42-204ENST00000548545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.248e-10■■■□□ 17.4
MRPL42-204ENST00000548545 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
MRPL42-204ENST00000548545 ZBTB22O15209 634 aa13.45□□□□□ -0.26
MRPL42-204ENST00000548545 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
MRPL42-204ENST00000548545 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
MRPL42-204ENST00000548545 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
MRPL42-204ENST00000548545 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
MRPL42-204ENST00000548545 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
MRPL42-204ENST00000548545 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
MRPL42-204ENST00000548545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
MRPL42-204ENST00000548545 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
MRPL42-204ENST00000548545 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
MRPL42-204ENST00000548545 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
MRPL42-204ENST00000548545 APLP2Q06481 763 aa13.06□□□□□ -0.32
MRPL42-204ENST00000548545 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
MRPL42-204ENST00000548545 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
MRPL42-204ENST00000548545 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
MRPL42-204ENST00000548545 CAPN15O75808 1086 aa12.93□□□□□ -0.34
MRPL42-204ENST00000548545 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
MRPL42-204ENST00000548545 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
MRPL42-204ENST00000548545 DSG3P32926 999 aa12.8□□□□□ -0.36
MRPL42-204ENST00000548545 ABCB7O75027 752 aa12.69□□□□□ -0.38
MRPL42-204ENST00000548545 POLA2Q14181 598 aa12.66□□□□□ -0.38
MRPL42-204ENST00000548545 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
MRPL42-204ENST00000548545 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
MRPL42-204ENST00000548545 FBLN2P98095 1184 aa12.37□□□□□ -0.43
MRPL42-204ENST00000548545 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
MRPL42-204ENST00000548545 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
MRPL42-204ENST00000548545 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
MRPL42-204ENST00000548545 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
MRPL42-204ENST00000548545 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
MRPL42-204ENST00000548545 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
MRPL42-204ENST00000548545 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
MRPL42-204ENST00000548545 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
MRPL42-204ENST00000548545 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
MRPL42-204ENST00000548545 FKBP8Q14318 412 aa11.99□□□□□ -0.49
MRPL42-204ENST00000548545 PROM2Q8N271 834 aa11.93□□□□□ -0.5
MRPL42-204ENST00000548545 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
MRPL42-204ENST00000548545 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
MRPL42-204ENST00000548545 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
MRPL42-204ENST00000548545 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
MRPL42-204ENST00000548545 POTEHQ6S545 545 aa11.75□□□□□ -0.53
MRPL42-204ENST00000548545 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
MRPL42-204ENST00000548545 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
MRPL42-204ENST00000548545 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
MRPL42-204ENST00000548545 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
MRPL42-204ENST00000548545 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
MRPL42-204ENST00000548545 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
MRPL42-204ENST00000548545 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
MRPL42-204ENST00000548545 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
MRPL42-204ENST00000548545 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
MRPL42-204ENST00000548545 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
MRPL42-204ENST00000548545 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
MRPL42-204ENST00000548545 MIER1Q8N108 512 aa11.4□□□□□ -0.58
MRPL42-204ENST00000548545 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
MRPL42-204ENST00000548545 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
MRPL42-204ENST00000548545 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
MRPL42-204ENST00000548545 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
MRPL42-204ENST00000548545 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
MRPL42-204ENST00000548545 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
MRPL42-204ENST00000548545 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
MRPL42-204ENST00000548545 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
MRPL42-204ENST00000548545 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
MRPL42-204ENST00000548545 NUBP1P53384 320 aa11.18□□□□□ -0.62
MRPL42-204ENST00000548545 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
MRPL42-204ENST00000548545 HAX1O00165 279 aa11.13□□□□□ -0.63
MRPL42-204ENST00000548545 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
MRPL42-204ENST00000548545 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
MRPL42-204ENST00000548545 EVX2Q03828 476 aa11.08□□□□□ -0.64
MRPL42-204ENST00000548545 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
MRPL42-204ENST00000548545 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
MRPL42-204ENST00000548545 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
MRPL42-204ENST00000548545 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
MRPL42-204ENST00000548545 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
MRPL42-204ENST00000548545 GSE1Q14687 1217 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms