Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
MMP8P22894 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP8P22894 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MMP8P22894 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP8P22894 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP8P22894 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP8P22894 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP8P22894 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP8P22894 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP8P22894 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP8P22894 AL589702.1-201ENST00000641229 1509 ntBASIC17.28■□□□□ 0.36
MMP8P22894 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MMP8P22894 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MMP8P22894 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP8P22894 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MMP8P22894 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 AL355306.1-201ENST00000415580 579 ntBASIC17.28■□□□□ 0.36
MMP8P22894 AC004832.2-201ENST00000426397 482 ntBASIC17.28■□□□□ 0.36
MMP8P22894 PRYP6-201ENST00000514804 343 ntBASIC17.28■□□□□ 0.36
MMP8P22894 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP8P22894 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.28■□□□□ 0.36
MMP8P22894 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP8P22894 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.28■□□□□ 0.36
MMP8P22894 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP8P22894 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP8P22894 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
MMP8P22894 AKAP8P1-201ENST00000434743 1349 ntBASIC17.27■□□□□ 0.36
MMP8P22894 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 MIR648-201ENST00000385046 94 ntBASIC17.27■□□□□ 0.36
MMP8P22894 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 ADH5P3-201ENST00000433842 1137 ntBASIC17.27■□□□□ 0.36
MMP8P22894 AP000347.1-202ENST00000435868 847 ntBASIC17.27■□□□□ 0.36
MMP8P22894 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP8P22894 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.27■□□□□ 0.36
MMP8P22894 AC073389.1-201ENST00000595595 795 ntBASIC17.27■□□□□ 0.36
MMP8P22894 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MMP8P22894 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP8P22894 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MMP8P22894 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.27■□□□□ 0.35
MMP8P22894 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
MMP8P22894 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP8P22894 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP8P22894 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
MMP8P22894 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
MMP8P22894 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
MMP8P22894 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
MMP8P22894 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP8P22894 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP8P22894 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MMP8P22894 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP8P22894 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP8P22894 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP8P22894 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP8P22894 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP8P22894 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP8P22894 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.26■□□□□ 0.35
MMP8P22894 FAM58CP-201ENST00000435741 640 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms