Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 AC136621.1-201ENST00000624017 2304 ntBASIC15.64■□□□□ 0.09
AP4S1Q9Y587 LINC01144-201ENST00000626198 1710 ntBASIC15.64■□□□□ 0.09
AP4S1Q9Y587 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 COX11P1-201ENST00000489116 835 ntBASIC15.63■□□□□ 0.09
AP4S1Q9Y587 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PCGF3-213ENST00000620529 1899 ntBASIC15.63■□□□□ 0.09
AP4S1Q9Y587 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4S1Q9Y587 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 LINC01568-207ENST00000641790 1380 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 KRT8P39-201ENST00000396270 1433 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 MIR648-201ENST00000385046 94 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 TSPY20P-201ENST00000450910 630 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 RN7SL606P-201ENST00000472779 293 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 AC008550.1-201ENST00000511500 884 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms