Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AL645728.1-201ENST00000366221 2101 ntBASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TERC-201ENST00000602385 541 ntBASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 OR2I1P-210ENST00000642037 4691 ntBASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 DUSP5P1-201ENST00000441325 1139 ntBASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 EMBP1-201ENST00000458200 901 ntBASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AC004706.3-202ENST00000621574 984 ntBASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms