Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CRYGEP-201ENST00000412192 528 ntBASIC15.64■□□□□ 0.09
COL21A1Q96P44 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 AC034105.1-201ENST00000563488 319 ntBASIC15.64■□□□□ 0.09
COL21A1Q96P44 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 TSPY26P-202ENST00000565928 3884 ntBASIC15.64■□□□□ 0.09
COL21A1Q96P44 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 AC129492.6-201ENST00000611383 1305 ntBASIC15.64■□□□□ 0.09
COL21A1Q96P44 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL21A1Q96P44 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL21A1Q96P44 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 TOP3BP1-201ENST00000420768 1380 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 AL022342.1-201ENST00000400363 863 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 VN2R19P-201ENST00000442399 1052 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 AC106730.1-201ENST00000566722 1090 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 AL139011.1-202ENST00000642063 584 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 ME2P1-201ENST00000426028 1970 ntBASIC15.63■□□□□ 0.09
COL21A1Q96P44 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.63■□□□□ 0.09
COL21A1Q96P44 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL21A1Q96P44 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms