Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LCA10Q71F78 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC8.97□□□□□ -0.97
LCA10Q71F78 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC8.97□□□□□ -0.97
LCA10Q71F78 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LCA10Q71F78 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
LCA10Q71F78 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC8.96□□□□□ -0.97
LCA10Q71F78 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.96□□□□□ -0.97
LCA10Q71F78 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
LCA10Q71F78 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LCA10Q71F78 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
LCA10Q71F78 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
LCA10Q71F78 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LCA10Q71F78 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CRYGFP-201ENST00000418459 633 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC8.96□□□□□ -0.98
LCA10Q71F78 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 CD99P1-205ENST00000527459 561 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 AC009065.1-201ENST00000564055 1225 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 MIR4674-201ENST00000582457 87 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 MIR4651-201ENST00000582622 73 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC8.96□□□□□ -0.98
LCA10Q71F78 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC8.96□□□□□ -0.98
LCA10Q71F78 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 AL359736.2-201ENST00000621992 437 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC8.96□□□□□ -0.98
LCA10Q71F78 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LCA10Q71F78 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC8.96□□□□□ -0.98
LCA10Q71F78 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC8.96□□□□□ -0.98
LCA10Q71F78 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 HOXB1-202ENST00000577092 1414 ntBASIC8.96□□□□□ -0.98
LCA10Q71F78 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
LCA10Q71F78 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AC005912.2-201ENST00000619492 2400 ntBASIC8.95□□□□□ -0.98
LCA10Q71F78 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC8.95□□□□□ -0.98
LCA10Q71F78 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms