Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 AC005336.2-201ENST00000593183 939 ntBASIC15.67■□□□□ 0.1
AP4S1Q9Y587 AC073592.5-201ENST00000624854 528 ntBASIC15.67■□□□□ 0.1
AP4S1Q9Y587 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.66■□□□□ 0.1
AP4S1Q9Y587 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 NUS1P1-201ENST00000446295 882 ntBASIC15.66■□□□□ 0.1
AP4S1Q9Y587 RNF126P1-202ENST00000569893 925 ntBASIC15.66■□□□□ 0.1
AP4S1Q9Y587 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 AL353801.3-201ENST00000609898 542 ntBASIC15.66■□□□□ 0.1
AP4S1Q9Y587 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
AP4S1Q9Y587 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4S1Q9Y587 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
AP4S1Q9Y587 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 HBZP1-201ENST00000354915 429 ntBASIC15.64■□□□□ 0.09
AP4S1Q9Y587 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.64■□□□□ 0.09
AP4S1Q9Y587 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms