Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AL645728.1-201ENST00000366221 2101 ntBASIC17.07■□□□□ 0.32
IFT43Q96FT9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC211486.1-202ENST00000416371 468 ntBASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC211476.1-201ENST00000503899 468 ntBASIC17.07■□□□□ 0.32
IFT43Q96FT9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 C20orf181-201ENST00000623918 480 ntBASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC078925.2-201ENST00000624013 1973 ntBASIC17.07■□□□□ 0.32
IFT43Q96FT9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFT43Q96FT9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
IFT43Q96FT9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 MKNK2P1-201ENST00000437526 628 ntBASIC17.06■□□□□ 0.32
IFT43Q96FT9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 AC096734.2-201ENST00000562054 433 ntBASIC17.06■□□□□ 0.32
IFT43Q96FT9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IFT43Q96FT9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFT43Q96FT9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms