Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AC132938.5-201ENST00000624980 1813 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 KLF4P1-201ENST00000412782 1185 ntBASIC15.32■□□□□ 0.04
TUBA1AQ71U36 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 AL121912.1-201ENST00000603683 238 ntBASIC15.32■□□□□ 0.04
TUBA1AQ71U36 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 AP000867.4-201ENST00000641616 219 ntBASIC15.32■□□□□ 0.04
TUBA1AQ71U36 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 AL353593.2-201ENST00000602529 1483 ntBASIC15.32■□□□□ 0.04
TUBA1AQ71U36 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
TUBA1AQ71U36 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1AQ71U36 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ALOX12P2-203ENST00000570921 1945 ntBASIC15.31■□□□□ 0.04
TUBA1AQ71U36 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SART3-203ENST00000546611 1184 ntBASIC15.31■□□□□ 0.04
TUBA1AQ71U36 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms