Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
FOXG1P55316 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
FOXG1P55316 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
FOXG1P55316 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.46□□□□□ -0.1
FOXG1P55316 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FOXG1P55316 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXG1P55316 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.45□□□□□ -0.1
FOXG1P55316 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXG1P55316 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.45□□□□□ -0.1
FOXG1P55316 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.45□□□□□ -0.1
FOXG1P55316 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 AC093724.1-201ENST00000448659 1027 ntBASIC14.45□□□□□ -0.1
FOXG1P55316 HLA-J-203ENST00000494367 1087 ntBASIC14.45□□□□□ -0.1
FOXG1P55316 AC105233.2-201ENST00000523697 349 ntBASIC14.45□□□□□ -0.1
FOXG1P55316 AF228730.5-201ENST00000530288 346 ntBASIC14.45□□□□□ -0.1
FOXG1P55316 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.45□□□□□ -0.1
FOXG1P55316 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
FOXG1P55316 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXG1P55316 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXG1P55316 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXG1P55316 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXG1P55316 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FOXG1P55316 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.44□□□□□ -0.1
FOXG1P55316 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 AC005622.1-201ENST00000636801 1703 ntBASIC14.44□□□□□ -0.1
FOXG1P55316 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.44□□□□□ -0.1
FOXG1P55316 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 PMS2P2-201ENST00000425039 1128 ntBASIC14.44□□□□□ -0.1
FOXG1P55316 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXG1P55316 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXG1P55316 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.44□□□□□ -0.1
FOXG1P55316 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXG1P55316 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.44□□□□□ -0.1
FOXG1P55316 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXG1P55316 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms