RNA–Protein interactions for RNA: ENST00000397799.1

COL8A2-202, Transcript of collagen type VIII alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL8A2, Length 4,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-202ENST00000397799 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.67
COL8A2-202ENST00000397799 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
COL8A2-202ENST00000397799 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
COL8A2-202ENST00000397799 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
COL8A2-202ENST00000397799 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
COL8A2-202ENST00000397799 ABCC9O60706 1549 aa27.17■■□□□ 1.94
COL8A2-202ENST00000397799 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
COL8A2-202ENST00000397799 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
COL8A2-202ENST00000397799 APLP2Q06481 763 aa26.86■■□□□ 1.89
COL8A2-202ENST00000397799 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
COL8A2-202ENST00000397799 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
COL8A2-202ENST00000397799 RANGAP1P46060 587 aaPredicted RBP26.42■■□□□ 1.82
COL8A2-202ENST00000397799 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
COL8A2-202ENST00000397799 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
COL8A2-202ENST00000397799 TTBK1Q5TCY1 1321 aaPredicted RBP26.29■■□□□ 1.8
COL8A2-202ENST00000397799 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
COL8A2-202ENST00000397799 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
COL8A2-202ENST00000397799 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.78
COL8A2-202ENST00000397799 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
COL8A2-202ENST00000397799 LOC105371045A0A1W2PR82 267 aa25.78■■□□□ 1.72
COL8A2-202ENST00000397799 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
COL8A2-202ENST00000397799 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
COL8A2-202ENST00000397799 NACADO15069 1562 aa25.64■■□□□ 1.69
COL8A2-202ENST00000397799 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
COL8A2-202ENST00000397799 PPARGC1BQ86YN6 1023 aaKnown RBP25.63■■□□□ 1.69
COL8A2-202ENST00000397799 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
COL8A2-202ENST00000397799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
COL8A2-202ENST00000397799 HNRNPUL2Q1KMD3 747 aaKnown RBP25.47■■□□□ 1.67
COL8A2-202ENST00000397799 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
COL8A2-202ENST00000397799 ITGAEP38570 1179 aa25.23■■□□□ 1.63
COL8A2-202ENST00000397799 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
COL8A2-202ENST00000397799 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
COL8A2-202ENST00000397799 MYT1LQ9UL68 1186 aa25.09■■□□□ 1.61
COL8A2-202ENST00000397799 FBLN2P98095 1184 aa25.09■■□□□ 1.61
COL8A2-202ENST00000397799 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
COL8A2-202ENST00000397799 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
COL8A2-202ENST00000397799 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
COL8A2-202ENST00000397799 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
COL8A2-202ENST00000397799 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
COL8A2-202ENST00000397799 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
COL8A2-202ENST00000397799 HRCP23327 699 aa24.8■■□□□ 1.56
COL8A2-202ENST00000397799 CENPBP07199 599 aaPredicted RBP24.79■■□□□ 1.56
COL8A2-202ENST00000397799 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
COL8A2-202ENST00000397799 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
COL8A2-202ENST00000397799 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
COL8A2-202ENST00000397799 ARID3CA6NKF2 412 aa24.55■■□□□ 1.52
COL8A2-202ENST00000397799 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
COL8A2-202ENST00000397799 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
COL8A2-202ENST00000397799 EEA1Q15075 1411 aa24.51■■□□□ 1.51
COL8A2-202ENST00000397799 POLR3GLQ9BT43 218 aa24.44■■□□□ 1.5
COL8A2-202ENST00000397799 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
COL8A2-202ENST00000397799 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
COL8A2-202ENST00000397799 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
COL8A2-202ENST00000397799 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
COL8A2-202ENST00000397799 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
COL8A2-202ENST00000397799 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
COL8A2-202ENST00000397799 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
COL8A2-202ENST00000397799 CLIP1P30622 1438 aa24.3■■□□□ 1.48
COL8A2-202ENST00000397799 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
COL8A2-202ENST00000397799 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
COL8A2-202ENST00000397799 NEFLP07196 543 aa24.26■■□□□ 1.47
COL8A2-202ENST00000397799 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
COL8A2-202ENST00000397799 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
COL8A2-202ENST00000397799 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
COL8A2-202ENST00000397799 WIZO95785 1651 aa24.16■■□□□ 1.46
COL8A2-202ENST00000397799 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
COL8A2-202ENST00000397799 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
COL8A2-202ENST00000397799 MTUS2Q5JR59 1369 aa24.11■■□□□ 1.45
COL8A2-202ENST00000397799 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
COL8A2-202ENST00000397799 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
COL8A2-202ENST00000397799 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
COL8A2-202ENST00000397799 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
COL8A2-202ENST00000397799 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.45
COL8A2-202ENST00000397799 ZNF326Q5BKZ1 582 aaKnown RBP24.07■■□□□ 1.44
COL8A2-202ENST00000397799 SLC4A1APQ9BWU0 796 aaKnown RBP24.03■■□□□ 1.44
COL8A2-202ENST00000397799 CUX2O14529 1486 aa24.03■■□□□ 1.44
COL8A2-202ENST00000397799 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
COL8A2-202ENST00000397799 SOGA1O94964 1423 aa23.98■■□□□ 1.43
COL8A2-202ENST00000397799 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
COL8A2-202ENST00000397799 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
COL8A2-202ENST00000397799 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
COL8A2-202ENST00000397799 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
COL8A2-202ENST00000397799 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
COL8A2-202ENST00000397799 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
COL8A2-202ENST00000397799 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
COL8A2-202ENST00000397799 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
COL8A2-202ENST00000397799 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
COL8A2-202ENST00000397799 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
COL8A2-202ENST00000397799 ANP32CO43423 234 aa23.76■■□□□ 1.39
COL8A2-202ENST00000397799 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
COL8A2-202ENST00000397799 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
COL8A2-202ENST00000397799 BCANQ96GW7 911 aa23.71■■□□□ 1.39
COL8A2-202ENST00000397799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.7■■□□□ 1.38
COL8A2-202ENST00000397799 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
COL8A2-202ENST00000397799 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
COL8A2-202ENST00000397799 ERICH6Q7L0X2 663 aa23.69■■□□□ 1.38
COL8A2-202ENST00000397799 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
COL8A2-202ENST00000397799 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
COL8A2-202ENST00000397799 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
COL8A2-202ENST00000397799 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms