Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 AP002414.3-201ENST00000589352 1468 ntBASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
HNRNPCL4P0DMR1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
HNRNPCL4P0DMR1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 AL365203.3-201ENST00000609742 2057 ntBASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HNRNPCL4P0DMR1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AC108073.2-201ENST00000464002 357 ntBASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AC012640.2-201ENST00000561606 901 ntBASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 MIR4515-201ENST00000584082 81 ntBASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 AC004790.2-201ENST00000623588 572 ntBASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HNRNPCL4P0DMR1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms