Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HNRNPCL4P0DMR1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
HNRNPCL4P0DMR1 AL356512.1-201ENST00000607453 1739 ntBASIC30.7■■■□□ 2.5
HNRNPCL4P0DMR1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.6■■■□□ 2.49
HNRNPCL4P0DMR1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.59■■■□□ 2.49
HNRNPCL4P0DMR1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
HNRNPCL4P0DMR1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.27■■■□□ 2.44
HNRNPCL4P0DMR1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
HNRNPCL4P0DMR1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HNRNPCL4P0DMR1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.97■■■□□ 2.39
HNRNPCL4P0DMR1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
HNRNPCL4P0DMR1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
HNRNPCL4P0DMR1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
HNRNPCL4P0DMR1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
HNRNPCL4P0DMR1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.4■■■□□ 2.3
HNRNPCL4P0DMR1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.28■■■□□ 2.28
HNRNPCL4P0DMR1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HNRNPCL4P0DMR1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.28
HNRNPCL4P0DMR1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
HNRNPCL4P0DMR1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
HNRNPCL4P0DMR1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
HNRNPCL4P0DMR1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HNRNPCL4P0DMR1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
HNRNPCL4P0DMR1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
HNRNPCL4P0DMR1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
HNRNPCL4P0DMR1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.65■■■□□ 2.18
HNRNPCL4P0DMR1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
HNRNPCL4P0DMR1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
HNRNPCL4P0DMR1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
HNRNPCL4P0DMR1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
HNRNPCL4P0DMR1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
HNRNPCL4P0DMR1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
HNRNPCL4P0DMR1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HNRNPCL4P0DMR1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
HNRNPCL4P0DMR1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HNRNPCL4P0DMR1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.38■■■□□ 2.13
HNRNPCL4P0DMR1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
HNRNPCL4P0DMR1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.34■■■□□ 2.13
HNRNPCL4P0DMR1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HNRNPCL4P0DMR1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.23■■■□□ 2.11
HNRNPCL4P0DMR1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
HNRNPCL4P0DMR1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.05■■■□□ 2.08
HNRNPCL4P0DMR1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HNRNPCL4P0DMR1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.94■■■□□ 2.06
HNRNPCL4P0DMR1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
HNRNPCL4P0DMR1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
HNRNPCL4P0DMR1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.89■■■□□ 2.06
HNRNPCL4P0DMR1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
HNRNPCL4P0DMR1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
HNRNPCL4P0DMR1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.8■■■□□ 2.04
HNRNPCL4P0DMR1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.78■■■□□ 2.04
HNRNPCL4P0DMR1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
HNRNPCL4P0DMR1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
HNRNPCL4P0DMR1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
HNRNPCL4P0DMR1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.62■■■□□ 2.01
HNRNPCL4P0DMR1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
HNRNPCL4P0DMR1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HNRNPCL4P0DMR1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HNRNPCL4P0DMR1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HNRNPCL4P0DMR1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HNRNPCL4P0DMR1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HNRNPCL4P0DMR1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HNRNPCL4P0DMR1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
HNRNPCL4P0DMR1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
HNRNPCL4P0DMR1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
HNRNPCL4P0DMR1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
HNRNPCL4P0DMR1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
HNRNPCL4P0DMR1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
HNRNPCL4P0DMR1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HNRNPCL4P0DMR1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.24■■□□□ 1.95
HNRNPCL4P0DMR1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
HNRNPCL4P0DMR1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.2■■□□□ 1.94
HNRNPCL4P0DMR1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HNRNPCL4P0DMR1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.14■■□□□ 1.94
HNRNPCL4P0DMR1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HNRNPCL4P0DMR1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
HNRNPCL4P0DMR1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
HNRNPCL4P0DMR1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HNRNPCL4P0DMR1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HNRNPCL4P0DMR1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
HNRNPCL4P0DMR1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HNRNPCL4P0DMR1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HNRNPCL4P0DMR1 AC145285.7-201ENST00000614819 1539 ntBASIC27.02■■□□□ 1.92
HNRNPCL4P0DMR1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
HNRNPCL4P0DMR1 AC015813.7-201ENST00000623294 581 ntBASIC27.02■■□□□ 1.92
HNRNPCL4P0DMR1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
HNRNPCL4P0DMR1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.9■■□□□ 1.9
HNRNPCL4P0DMR1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HNRNPCL4P0DMR1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
HNRNPCL4P0DMR1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HNRNPCL4P0DMR1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
HNRNPCL4P0DMR1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
HNRNPCL4P0DMR1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HNRNPCL4P0DMR1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.76■■□□□ 1.87
HNRNPCL4P0DMR1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
HNRNPCL4P0DMR1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.76■■□□□ 1.87
HNRNPCL4P0DMR1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
HNRNPCL4P0DMR1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HNRNPCL4P0DMR1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.74■■□□□ 1.87
HNRNPCL4P0DMR1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms