Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.59■□□□□ 0.73
CRNKL1Q9BZJ0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CRNKL1Q9BZJ0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CRNKL1Q9BZJ0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CRNKL1Q9BZJ0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 SPCS2P1-201ENST00000561636 679 ntBASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CRNKL1Q9BZJ0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRNKL1Q9BZJ0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 RNA5SP421-201ENST00000516864 134 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 IGHV3-42-201ENST00000520410 361 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 AC024267.1-201ENST00000582320 895 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 AL096865.1-201ENST00000606796 927 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 AC005622.1-201ENST00000636801 1703 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.56■□□□□ 0.72
CRNKL1Q9BZJ0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CRNKL1Q9BZJ0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms