Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 GGT4P-201ENST00000623672 1708 ntBASIC15.86■□□□□ 0.13
RNF44Q7L0R7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC106886.4-201ENST00000623557 2502 ntBASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC004461.1-201ENST00000412461 403 ntBASIC15.86■□□□□ 0.13
RNF44Q7L0R7 CNN2P11-201ENST00000429351 262 ntBASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC079140.1-201ENST00000508039 487 ntBASIC15.86■□□□□ 0.13
RNF44Q7L0R7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF44Q7L0R7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RPS8P6-201ENST00000426177 609 ntBASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SNHG9-202ENST00000564014 471 ntBASIC15.85■□□□□ 0.13
RNF44Q7L0R7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AL596442.2-201ENST00000610240 980 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms