Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 AL118508.1-201ENST00000613502 2345 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 ME2P1-201ENST00000426028 1970 ntBASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AL135744.1-201ENST00000565098 629 ntBASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R3AQ6IN85 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.77■□□□□ 0.59
PPP4R3AQ6IN85 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AL139384.1-201ENST00000612143 3047 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 CEND1P1-201ENST00000451006 455 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 RN7SL589P-201ENST00000481268 310 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AC243562.1-201ENST00000560672 389 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 AC026120.1-201ENST00000611536 926 ntBASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R3AQ6IN85 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms