Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 AL121912.1-201ENST00000603683 238 ntBASIC16.41■□□□□ 0.22
SNX31Q8N9S9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 MIR1199-201ENST00000621445 119 ntBASIC16.41■□□□□ 0.22
SNX31Q8N9S9 AF228730.7-201ENST00000641842 219 ntBASIC16.41■□□□□ 0.22
SNX31Q8N9S9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 LINC00895-201ENST00000629028 1637 ntBASIC16.41■□□□□ 0.22
SNX31Q8N9S9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNX31Q8N9S9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AF186996.4-201ENST00000467186 377 ntBASIC16.4■□□□□ 0.22
SNX31Q8N9S9 RPS15P9-201ENST00000494093 319 ntBASIC16.4■□□□□ 0.22
SNX31Q8N9S9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 TSPY26P-202ENST00000565928 3884 ntBASIC16.4■□□□□ 0.22
SNX31Q8N9S9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX31Q8N9S9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.39■□□□□ 0.22
SNX31Q8N9S9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SNX31Q8N9S9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.39■□□□□ 0.22
SNX31Q8N9S9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.39■□□□□ 0.21
SNX31Q8N9S9 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 AC004870.1-201ENST00000315132 882 ntBASIC16.39■□□□□ 0.21
SNX31Q8N9S9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX31Q8N9S9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms