Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 CNN2P11-201ENST00000429351 262 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 DNAJB3-202ENST00000449667 1266 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 IGHV3-62-201ENST00000520057 340 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.59■□□□□ 0.25
USP45Q70EL2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 AC243562.1-201ENST00000560672 389 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.59■□□□□ 0.25
USP45Q70EL2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.59■□□□□ 0.25
USP45Q70EL2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.59■□□□□ 0.25
USP45Q70EL2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 AL596442.2-201ENST00000610240 980 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 AC009053.2-201ENST00000563701 2365 ntBASIC16.59■□□□□ 0.25
USP45Q70EL2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP45Q70EL2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
USP45Q70EL2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.59■□□□□ 0.25
USP45Q70EL2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.58■□□□□ 0.25
USP45Q70EL2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
USP45Q70EL2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
USP45Q70EL2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
USP45Q70EL2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 AL592309.1-201ENST00000443127 649 ntBASIC16.58■□□□□ 0.24
USP45Q70EL2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.58■□□□□ 0.24
USP45Q70EL2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.58■□□□□ 0.24
USP45Q70EL2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.58■□□□□ 0.24
USP45Q70EL2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
USP45Q70EL2 AC008267.7-201ENST00000624570 1194 ntBASIC16.58■□□□□ 0.24
USP45Q70EL2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.58■□□□□ 0.24
USP45Q70EL2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP45Q70EL2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
USP45Q70EL2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USP45Q70EL2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 LINC01144-201ENST00000626198 1710 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 AC004461.1-201ENST00000412461 403 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USP45Q70EL2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.57■□□□□ 0.24
USP45Q70EL2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 SPCS2P4-201ENST00000436160 681 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 PRYP6-201ENST00000514804 343 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.57■□□□□ 0.24
USP45Q70EL2 KRT8P23-201ENST00000560090 1207 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.57■□□□□ 0.24
USP45Q70EL2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USP45Q70EL2 AC099398.1-201ENST00000567919 2776 ntBASIC16.57■□□□□ 0.24
USP45Q70EL2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.57■□□□□ 0.24
USP45Q70EL2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP45Q70EL2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.57■□□□□ 0.24
USP45Q70EL2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP45Q70EL2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP45Q70EL2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP45Q70EL2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.56■□□□□ 0.24
USP45Q70EL2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP45Q70EL2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms