Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.97■□□□□ 0.63
USH1GQ495M9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.97■□□□□ 0.63
USH1GQ495M9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.97■□□□□ 0.63
USH1GQ495M9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC106886.4-201ENST00000623557 2502 ntBASIC18.96■□□□□ 0.63
USH1GQ495M9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.96■□□□□ 0.63
USH1GQ495M9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.96■□□□□ 0.63
USH1GQ495M9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.96■□□□□ 0.63
USH1GQ495M9 TREML5P-201ENST00000421694 576 ntBASIC18.96■□□□□ 0.63
USH1GQ495M9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.96■□□□□ 0.63
USH1GQ495M9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.96■□□□□ 0.63
USH1GQ495M9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.96■□□□□ 0.63
USH1GQ495M9 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.96■□□□□ 0.63
USH1GQ495M9 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.96■□□□□ 0.63
USH1GQ495M9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.96■□□□□ 0.63
USH1GQ495M9 AC003101.2-201ENST00000612557 442 ntBASIC18.96■□□□□ 0.63
USH1GQ495M9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USH1GQ495M9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.95■□□□□ 0.62
USH1GQ495M9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USH1GQ495M9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 FO538757.1-201ENST00000623083 1397 ntBASIC18.95■□□□□ 0.62
USH1GQ495M9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.95■□□□□ 0.62
USH1GQ495M9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.95■□□□□ 0.62
USH1GQ495M9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 SPTSSB-204ENST00000617024 1292 ntBASIC18.95■□□□□ 0.62
USH1GQ495M9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USH1GQ495M9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USH1GQ495M9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
USH1GQ495M9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USH1GQ495M9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USH1GQ495M9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USH1GQ495M9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USH1GQ495M9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USH1GQ495M9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.94■□□□□ 0.62
USH1GQ495M9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.94■□□□□ 0.62
USH1GQ495M9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USH1GQ495M9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USH1GQ495M9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USH1GQ495M9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms