Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A3P43003 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 HCG4-201ENST00000418983 998 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 PMS2P1-201ENST00000431037 1228 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 AC009078.2-202ENST00000463353 338 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 AC108751.1-201ENST00000490852 363 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A3P43003 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 OR7E47P-204ENST00000575924 449 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A3P43003 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A3P43003 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 PAUPAR-201ENST00000630360 2965 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A3P43003 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC1A3P43003 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC1A3P43003 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A3P43003 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A3P43003 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A3P43003 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 HLA-A-201ENST00000376802 1334 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC1A3P43003 LINC00554-201ENST00000564841 3011 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A3P43003 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC1A3P43003 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A3P43003 AC087641.1-201ENST00000557561 1021 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 CYP2A7P1-201ENST00000595391 815 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.27■□□□□ 0.04
SLC1A3P43003 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC1A3P43003 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 AL365203.3-201ENST00000609742 2057 ntBASIC15.27■□□□□ 0.03
SLC1A3P43003 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A3P43003 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC1A3P43003 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A3P43003 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A3P43003 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A3P43003 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 KRT8P39-201ENST00000396270 1433 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A3P43003 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A3P43003 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms