Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC188H7C350 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CCDC188H7C350 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC188H7C350 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC188H7C350 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC188H7C350 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC188H7C350 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AC211429.1-201ENST00000415277 523 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 AC087163.2-201ENST00000457299 853 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC188H7C350 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC188H7C350 MIR5100-201ENST00000579544 119 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 CYP2A7P1-201ENST00000595391 815 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 AC020765.3-201ENST00000613051 740 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AL022326.1-202ENST00000641533 845 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AP005117.1-201ENST00000584346 1413 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AC023824.1-201ENST00000562945 2975 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC188H7C350 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 AC006058.4-201ENST00000624016 1670 ntBASIC17.26■□□□□ 0.35
CCDC188H7C350 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC188H7C350 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC188H7C350 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC188H7C350 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 DBET-201ENST00000630918 3363 ntBASIC17.25■□□□□ 0.35
CCDC188H7C350 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC188H7C350 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 AC104819.1-201ENST00000504587 486 ntBASIC17.25■□□□□ 0.35
CCDC188H7C350 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC188H7C350 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC188H7C350 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC188H7C350 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC188H7C350 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC188H7C350 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CCDC188H7C350 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC188H7C350 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC188H7C350 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC188H7C350 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC188H7C350 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC188H7C350 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC188H7C350 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC188H7C350 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.24■□□□□ 0.35
CCDC188H7C350 BX005266.1-201ENST00000473402 457 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 FAM86EP-206ENST00000510506 987 ntBASIC17.24■□□□□ 0.35
CCDC188H7C350 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms