Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 FAM86GP-201ENST00000448322 971 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 CYMP-203ENST00000474680 1263 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 AC067863.1-201ENST00000494933 530 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 RARRES2P9-201ENST00000565168 469 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 AC106028.4-201ENST00000614509 607 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 AP3S2-216ENST00000617003 1561 ntBASIC17.47■□□□□ 0.39
CDH9Q9ULB4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH9Q9ULB4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 HLA-H-201ENST00000383620 1096 ntBASIC17.46■□□□□ 0.39
CDH9Q9ULB4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 AD000864.1-201ENST00000624076 2295 ntBASIC17.46■□□□□ 0.39
CDH9Q9ULB4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH9Q9ULB4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDH9Q9ULB4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 FAM220BP-201ENST00000377689 816 ntBASIC17.45■□□□□ 0.38
CDH9Q9ULB4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH9Q9ULB4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms