Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 AL355075.4-201ENST00000554988 638 ntBASIC12.62□□□□□ -0.39
AP1S3Q96PC3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 AC104640.1-201ENST00000562617 2109 ntBASIC12.62□□□□□ -0.39
AP1S3Q96PC3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 FAM8A6P-201ENST00000407496 1135 ntBASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.61□□□□□ -0.39
AP1S3Q96PC3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.61□□□□□ -0.39
AP1S3Q96PC3 AL391807.1-203ENST00000604392 2365 ntBASIC12.61□□□□□ -0.39
AP1S3Q96PC3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms