Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19■□□□□ 0.63
USH1GQ495M9 SPDYE7P-202ENST00000420373 878 ntBASIC19■□□□□ 0.63
USH1GQ495M9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19■□□□□ 0.63
USH1GQ495M9 AC051619.7-201ENST00000568314 623 ntBASIC19■□□□□ 0.63
USH1GQ495M9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 AL390955.2-201ENST00000603032 514 ntBASIC19■□□□□ 0.63
USH1GQ495M9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USH1GQ495M9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19■□□□□ 0.63
USH1GQ495M9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19■□□□□ 0.63
USH1GQ495M9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
USH1GQ495M9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.99■□□□□ 0.63
USH1GQ495M9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
USH1GQ495M9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 AP3S2-216ENST00000617003 1561 ntBASIC18.99■□□□□ 0.63
USH1GQ495M9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USH1GQ495M9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
USH1GQ495M9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.99■□□□□ 0.63
USH1GQ495M9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.99■□□□□ 0.63
USH1GQ495M9 MIR4453-201ENST00000584019 89 ntBASIC18.99■□□□□ 0.63
USH1GQ495M9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USH1GQ495M9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 GGT4P-201ENST00000623672 1708 ntBASIC18.99■□□□□ 0.63
USH1GQ495M9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.99■□□□□ 0.63
USH1GQ495M9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USH1GQ495M9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.99■□□□□ 0.63
USH1GQ495M9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USH1GQ495M9 GPAA1P2-202ENST00000606848 1787 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
USH1GQ495M9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.98■□□□□ 0.63
USH1GQ495M9 MIR943-201ENST00000401286 94 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 AC107890.1-201ENST00000422478 521 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.98■□□□□ 0.63
USH1GQ495M9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 RARRES2P9-201ENST00000565168 469 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 AC011467.4-201ENST00000594891 528 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.98■□□□□ 0.63
USH1GQ495M9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USH1GQ495M9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.98■□□□□ 0.63
USH1GQ495M9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.98■□□□□ 0.63
USH1GQ495M9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USH1GQ495M9 AC006538.1-201ENST00000567905 1585 ntBASIC18.98■□□□□ 0.63
USH1GQ495M9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.97■□□□□ 0.63
USH1GQ495M9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.97■□□□□ 0.63
USH1GQ495M9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
USH1GQ495M9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USH1GQ495M9 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.97■□□□□ 0.63
USH1GQ495M9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.97■□□□□ 0.63
USH1GQ495M9 AC093214.1-201ENST00000511688 1107 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms