Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.58■□□□□ 0.4
CTNNA1P35221 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.58■□□□□ 0.4
CTNNA1P35221 SART3-203ENST00000546611 1184 ntBASIC17.58■□□□□ 0.4
CTNNA1P35221 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.58■□□□□ 0.4
CTNNA1P35221 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.58■□□□□ 0.4
CTNNA1P35221 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.58■□□□□ 0.4
CTNNA1P35221 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNNA1P35221 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTNNA1P35221 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTNNA1P35221 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.58■□□□□ 0.4
CTNNA1P35221 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CTNNA1P35221 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTNNA1P35221 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CTNNA1P35221 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNNA1P35221 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNNA1P35221 FGFR3P6-201ENST00000457012 610 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNNA1P35221 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 MTDHP4-201ENST00000600287 670 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 AF228730.7-201ENST00000641842 219 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 GGT4P-201ENST00000623672 1708 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNNA1P35221 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 AL031731.1-201ENST00000642131 2094 ntBASIC17.57■□□□□ 0.4
CTNNA1P35221 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTNNA1P35221 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNNA1P35221 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTNNA1P35221 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CTNNA1P35221 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
CTNNA1P35221 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CTNNA1P35221 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTNNA1P35221 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CTNNA1P35221 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 KRT18P31-201ENST00000506277 1292 ntBASIC17.56■□□□□ 0.4
CTNNA1P35221 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTNNA1P35221 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNNA1P35221 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 KRT8P39-201ENST00000396270 1433 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms