Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.16■□□□□ 0.34
CCR1P32246 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.16■□□□□ 0.34
CCR1P32246 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCR1P32246 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCR1P32246 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR1P32246 LINC01144-201ENST00000626198 1710 ntBASIC17.16■□□□□ 0.34
CCR1P32246 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCR1P32246 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCR1P32246 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.15■□□□□ 0.34
CCR1P32246 SNHG9-202ENST00000564014 471 ntBASIC17.15■□□□□ 0.34
CCR1P32246 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.15■□□□□ 0.34
CCR1P32246 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCR1P32246 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCR1P32246 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR1P32246 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CCR1P32246 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.14■□□□□ 0.34
CCR1P32246 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCR1P32246 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCR1P32246 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 SPCS2P4-201ENST00000436160 681 ntBASIC17.14■□□□□ 0.33
CCR1P32246 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 DNAJB3-202ENST00000449667 1266 ntBASIC17.14■□□□□ 0.33
CCR1P32246 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 IGHV3-62-201ENST00000520057 340 ntBASIC17.14■□□□□ 0.33
CCR1P32246 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.14■□□□□ 0.33
CCR1P32246 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.14■□□□□ 0.33
CCR1P32246 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.14■□□□□ 0.33
CCR1P32246 AC004835.2-201ENST00000603762 682 ntBASIC17.14■□□□□ 0.33
CCR1P32246 AC008267.7-201ENST00000624570 1194 ntBASIC17.14■□□□□ 0.33
CCR1P32246 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR1P32246 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCR1P32246 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR1P32246 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.13■□□□□ 0.33
CCR1P32246 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCR1P32246 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR1P32246 AC004461.1-201ENST00000412461 403 ntBASIC17.13■□□□□ 0.33
CCR1P32246 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.13■□□□□ 0.33
CCR1P32246 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCR1P32246 RPS8P6-201ENST00000426177 609 ntBASIC17.13■□□□□ 0.33
CCR1P32246 CNN2P11-201ENST00000429351 262 ntBASIC17.13■□□□□ 0.33
CCR1P32246 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms