Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ALOX12P2-203ENST00000570921 1945 ntBASIC16.75■□□□□ 0.27
HLA-DPA1P20036 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 AC140658.5-201ENST00000438532 169 ntBASIC16.75■□□□□ 0.27
HLA-DPA1P20036 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 LINC01144-201ENST00000626198 1710 ntBASIC16.75■□□□□ 0.27
HLA-DPA1P20036 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 PCGF3-213ENST00000620529 1899 ntBASIC16.75■□□□□ 0.27
HLA-DPA1P20036 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 PDPK2P-202ENST00000562415 1191 ntBASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AL009183.1-201ENST00000603760 355 ntBASIC16.74■□□□□ 0.27
HLA-DPA1P20036 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPA1P20036 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DPA1P20036 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms