Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 AC093214.1-201ENST00000511688 1107 ntBASIC15.04■□□□□ -0
FREM3P0C091 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.04■□□□□ -0
FREM3P0C091 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.04■□□□□ -0
FREM3P0C091 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 AP3S2-216ENST00000617003 1561 ntBASIC15.04■□□□□ -0
FREM3P0C091 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM3P0C091 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 AC092474.2-201ENST00000424288 719 ntBASIC15.04■□□□□ -0
FREM3P0C091 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
FREM3P0C091 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.04■□□□□ -0
FREM3P0C091 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
FREM3P0C091 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.03■□□□□ -0
FREM3P0C091 AC092364.2-201ENST00000596710 2692 ntBASIC15.03■□□□□ -0
FREM3P0C091 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.03■□□□□ -0
FREM3P0C091 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.03■□□□□ -0
FREM3P0C091 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.03■□□□□ -0
FREM3P0C091 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.03■□□□□ -0
FREM3P0C091 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FREM3P0C091 AL031731.1-201ENST00000642131 2094 ntBASIC15.03■□□□□ -0
FREM3P0C091 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.03■□□□□ -0
FREM3P0C091 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM3P0C091 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.03■□□□□ -0
FREM3P0C091 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.02■□□□□ -0
FREM3P0C091 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
FREM3P0C091 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
FREM3P0C091 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 KRT18P34-201ENST00000488218 1270 ntBASIC15.02■□□□□ -0
FREM3P0C091 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.02■□□□□ -0
FREM3P0C091 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.02■□□□□ -0
FREM3P0C091 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
FREM3P0C091 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
FREM3P0C091 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.02■□□□□ -0
FREM3P0C091 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
FREM3P0C091 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.02□□□□□ -0.01
FREM3P0C091 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
FREM3P0C091 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FREM3P0C091 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms