Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 AC099521.2-201ENST00000619354 2036 ntBASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 AC002558.1-201ENST00000488906 803 ntBASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHTOPQ9Y3Y2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC006058.4-201ENST00000624016 1670 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 HLA-DQB2-231ENST00000435145 2026 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC133681.1-201ENST00000465482 601 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC113404.2-201ENST00000507884 177 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC233263.1-201ENST00000578059 224 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC022517.1-201ENST00000592429 346 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 AC073195.1-201ENST00000607241 877 ntBASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHTOPQ9Y3Y2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms