RNA–Protein interactions for RNA: ENST00000415858.3

CT47A4-201, Transcript of cancer/testis antigen family 47, member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A4, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A4-201ENST00000415858 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
CT47A4-201ENST00000415858 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
CT47A4-201ENST00000415858 ABCC9O60706 1549 aa38.07■■■■□ 3.68
CT47A4-201ENST00000415858 ZCCHC6Q5VYS8 1495 aaKnown RBP37.04■■■■□ 3.52
CT47A4-201ENST00000415858 NACADO15069 1562 aa36.95■■■■□ 3.51
CT47A4-201ENST00000415858 MYO15BQ96JP2 1530 aa36.92■■■■□ 3.5
CT47A4-201ENST00000415858 DCAF8L2P0C7V8 631 aa36.91■■■■□ 3.5
CT47A4-201ENST00000415858 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
CT47A4-201ENST00000415858 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
CT47A4-201ENST00000415858 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
CT47A4-201ENST00000415858 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
CT47A4-201ENST00000415858 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
CT47A4-201ENST00000415858 PABPN1Q86U42 306 aaKnown RBP eCLIP35.64■■■■□ 3.3
CT47A4-201ENST00000415858 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
CT47A4-201ENST00000415858 DNAJC5BQ9UF47 199 aa34.81■■■■□ 3.16
CT47A4-201ENST00000415858 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
CT47A4-201ENST00000415858 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
CT47A4-201ENST00000415858 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
CT47A4-201ENST00000415858 BAZ1AQ9NRL2 1556 aaPredicted RBP34.41■■■■□ 3.1
CT47A4-201ENST00000415858 SMARCA4P51532 1647 aa34.32■■■■□ 3.08
CT47A4-201ENST00000415858 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
CT47A4-201ENST00000415858 SMARCA2P51531 1590 aa34.13■■■■□ 3.05
CT47A4-201ENST00000415858 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
CT47A4-201ENST00000415858 ATAD2BQ9ULI0 1458 aa34.11■■■■□ 3.05
CT47A4-201ENST00000415858 PEG3Q9GZU2 1588 aa34.07■■■■□ 3.05
CT47A4-201ENST00000415858 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.02
CT47A4-201ENST00000415858 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
CT47A4-201ENST00000415858 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
CT47A4-201ENST00000415858 WIZO95785 1651 aa33.74■■■□□ 2.99
CT47A4-201ENST00000415858 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.95
CT47A4-201ENST00000415858 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
CT47A4-201ENST00000415858 CADPSQ9ULU8 1353 aa33.12■■■□□ 2.89
CT47A4-201ENST00000415858 CCDC88BA6NC98 1476 aa33.11■■■□□ 2.89
CT47A4-201ENST00000415858 LAMC3Q9Y6N6 1575 aa33.1■■■□□ 2.89
CT47A4-201ENST00000415858 NESP48681 1621 aa33.01■■■□□ 2.87
CT47A4-201ENST00000415858 CFTRP13569 1480 aa32.98■■■□□ 2.87
CT47A4-201ENST00000415858 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
CT47A4-201ENST00000415858 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
CT47A4-201ENST00000415858 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
CT47A4-201ENST00000415858 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
CT47A4-201ENST00000415858 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
CT47A4-201ENST00000415858 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
CT47A4-201ENST00000415858 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
CT47A4-201ENST00000415858 MRC2Q9UBG0 1479 aa32.5■■■□□ 2.79
CT47A4-201ENST00000415858 CUX2O14529 1486 aa32.46■■■□□ 2.79
CT47A4-201ENST00000415858 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.79
CT47A4-201ENST00000415858 WDR62O43379 1518 aa32.37■■■□□ 2.77
CT47A4-201ENST00000415858 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
CT47A4-201ENST00000415858 URB2Q14146 1524 aaKnown RBP32.28■■■□□ 2.76
CT47A4-201ENST00000415858 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
CT47A4-201ENST00000415858 DNMBPQ6XZF7 1577 aa32.18■■■□□ 2.74
CT47A4-201ENST00000415858 WRNQ14191 1432 aaPredicted RBP eCLIP32.01■■■□□ 2.72
CT47A4-201ENST00000415858 CUX1P39880 1505 aa32.01■■■□□ 2.72
CT47A4-201ENST00000415858 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
CT47A4-201ENST00000415858 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
CT47A4-201ENST00000415858 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
CT47A4-201ENST00000415858 TOP2BQ02880 1626 aa31.87■■■□□ 2.69
CT47A4-201ENST00000415858 SOGA1O94964 1423 aa31.85■■■□□ 2.69
CT47A4-201ENST00000415858 BIVM-ERCC5R4GMW8 1640 aa31.83■■■□□ 2.69
CT47A4-201ENST00000415858 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
CT47A4-201ENST00000415858 TARBP1Q13395 1621 aaKnown RBP31.77■■■□□ 2.68
CT47A4-201ENST00000415858 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
CT47A4-201ENST00000415858 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
CT47A4-201ENST00000415858 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
CT47A4-201ENST00000415858 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
CT47A4-201ENST00000415858 TDRD9Q8NDG6 1382 aaKnown RBP31.58■■■□□ 2.65
CT47A4-201ENST00000415858 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.64
CT47A4-201ENST00000415858 EIF4G3O43432 1585 aaKnown RBP31.55■■■□□ 2.64
CT47A4-201ENST00000415858 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
CT47A4-201ENST00000415858 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
CT47A4-201ENST00000415858 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
CT47A4-201ENST00000415858 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
CT47A4-201ENST00000415858 KIF27Q86VH2 1401 aa31.37■■■□□ 2.61
CT47A4-201ENST00000415858 MAGI1Q96QZ7 1491 aaPredicted RBP31.34■■■□□ 2.61
CT47A4-201ENST00000415858 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
CT47A4-201ENST00000415858 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
CT47A4-201ENST00000415858 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
CT47A4-201ENST00000415858 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
CT47A4-201ENST00000415858 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
CT47A4-201ENST00000415858 SYNJ2O15056 1496 aa31.2■■■□□ 2.58
CT47A4-201ENST00000415858 CHMP7Q8WUX9 453 aaPredicted RBP31.19■■■□□ 2.58
CT47A4-201ENST00000415858 IGF1RP08069 1367 aa31.17■■■□□ 2.58
CT47A4-201ENST00000415858 FHAD1B1AJZ9 1412 aa31.16■■■□□ 2.58
CT47A4-201ENST00000415858 FBLN2P98095 1184 aa31.15■■■□□ 2.58
CT47A4-201ENST00000415858 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
CT47A4-201ENST00000415858 EEA1Q15075 1411 aa31.05■■■□□ 2.56
CT47A4-201ENST00000415858 CHD1O14646 1710 aa31.03■■■□□ 2.56
CT47A4-201ENST00000415858 CUL7Q14999 1698 aa31.03■■■□□ 2.56
CT47A4-201ENST00000415858 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
CT47A4-201ENST00000415858 RUSC2Q8N2Y8 1516 aa31■■■□□ 2.55
CT47A4-201ENST00000415858 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
CT47A4-201ENST00000415858 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
CT47A4-201ENST00000415858 NUP160Q12769 1436 aa30.89■■■□□ 2.53
CT47A4-201ENST00000415858 RAPGEF2Q9Y4G8 1499 aa30.84■■■□□ 2.53
CT47A4-201ENST00000415858 PRXQ9BXM0 1461 aa30.82■■■□□ 2.52
CT47A4-201ENST00000415858 CLASP1Q7Z460 1538 aa30.81■■■□□ 2.52
CT47A4-201ENST00000415858 CEP170Q5SW79 1584 aa30.76■■■□□ 2.52
CT47A4-201ENST00000415858 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
CT47A4-201ENST00000415858 KIAA0586Q9BVV6 1533 aa30.7■■■□□ 2.51
CT47A4-201ENST00000415858 JPH4Q96JJ6 628 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms