Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 AC006538.1-201ENST00000567905 1585 ntBASIC17.62■□□□□ 0.41
CCDC50Q8IVM0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 HLA-J-202ENST00000469281 1241 ntBASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AL589182.2-201ENST00000619332 1049 ntBASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC50Q8IVM0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 KRT18P31-201ENST00000506277 1292 ntBASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 AC008608.2-201ENST00000606089 416 ntBASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 AC006277.1-201ENST00000624348 1610 ntBASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC50Q8IVM0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms